Information for 8-CTGBGAAATCCCC (Motif 8)

A G T C A C G T A T C G A C T G T A C G C T G A G T C A C G T A C G A T A G T C A G T C A G T C G A T C
Reverse Opposite:
C A T G A C T G A C T G C T A G C G T A A C G T A C G T A G C T A T G C T G A C A T G C C G T A C T A G
p-value:1e-13
log p-value:-3.056e+01
Information Content per bp:1.781
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif23.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets44.5 +/- 22.6bp
Average Position of motif in Background50.9 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CTGBGAAATCCCC-
--GGGAAATCCCCN
 A G T C A C G T A T C G A C T G T A C G C T G A G T C A C G T A C G A T A G T C A G T C A G T C G A T C A C G T
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CTGBGAAATCCCC
---GGAAATCCCC
 A G T C A C G T A T C G A C T G T A C G C T G A G T C A C G T A C G A T A G T C A G T C A G T C G A T C
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CTGBGAAATCCCC
-GGGGGAATCCCC
 A G T C A C G T A T C G A C T G T A C G C T G A G T C A C G T A C G A T A G T C A G T C A G T C G A T C
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CTGBGAAATCCCC
---GGAAATTCCC
 A G T C A C G T A T C G A C T G T A C G C T G A G T C A C G T A C G A T A G T C A G T C A G T C G A T C
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFKB2/MA0778.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CTGBGAAATCCCC-
-AGGGGATTCCCCT
 A G T C A C G T A T C G A C T G T A C G C T G A G T C A C G T A C G A T A G T C A G T C A G T C G A T C A C G T
A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CTGBGAAATCCCC
---GGAAATTCCC
 A G T C A C G T A T C G A C T G T A C G C T G A G T C A C G T A C G A T A G T C A G T C A G T C G A T C
A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTGBGAAATCCCC
---GGAAANCCCC
 A G T C A C G T A T C G A C T G T A C G C T G A G T C A C G T A C G A T A G T C A G T C A G T C G A T C
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTGBGAAATCCCC-
-AGGGGATTCCCCT
 A G T C A C G T A T C G A C T G T A C G C T G A G T C A C G T A C G A T A G T C A G T C A G T C G A T C A C G T
A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:CTGBGAAATCCCC-
--------TCCCCA
 A G T C A C G T A T C G A C T G T A C G C T G A G T C A C G T A C G A T A G T C A G T C A G T C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

PH0015.1_Crx/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGBGAAATCCCC----
-AGGCTAATCCCCAANG
 A G T C A C G T A T C G A C T G T A C G C T G A G T C A C G T A C G A T A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T
A C G T G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G