p-value: | 1e-5 |
log p-value: | -1.168e+01 |
Information Content per bp: | 1.768 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.34% |
Number of Background Sequences with motif | 2.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 55.0 +/- 27.1bp |
Average Position of motif in Background | 74.4 +/- 18.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CATGCATGCATGC- SCAGYCADGCATGAC |
|
|
|
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 2 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CATGCATGCATGC NGTCACGCTTGGCTGC |
|
|
|
PAX9/MA0781.1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CATGCATGCATGC- CGTCACGCATGACTGCA |
|
|
|
PAX1/MA0779.1/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CATGCATGCATGC- CGTCACGCATGACTGCA |
|
|
|
PB0170.1_Sox17_2/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CATGCATGCATGC---- NTTNTATGAATGTGNNC |
|
|
|
PB0178.1_Sox8_2/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CATGCATGCATGC---- ---ACATTCATGACACG |
|
|
|
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CATGCATGCATGC -TBGCACGCAA-- |
|
|
|
Pax6/MA0069.1/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CATGCATGCATGC TTCACGCATGAGTT- |
|
|
|
PB0028.1_Hbp1_1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CATGCATGCATGC- NNCATTCATTCATNNN |
|
|
|
PH0148.1_Pou3f3/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CATGCATGCATGC---- AAAATATGCATAATAAA |
|
|
|