Information for 21-CATYCTTTCA (Motif 29)

A G T C G T C A C G A T A G T C G T A C A G C T A C G T C G A T A G T C C G T A
Reverse Opposite:
A C G T C T A G G C T A G T C A C T G A A C T G T C A G C G T A A C G T A C T G
p-value:1e-6
log p-value:-1.483e+01
Information Content per bp:1.803
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif221.6
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets54.6 +/- 25.6bp
Average Position of motif in Background50.5 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CATYCTTTCA----
NNCATTCATTCATNNN
 A C G T A C G T A G T C G T C A C G A T A G T C G T A C A G C T A C G T C G A T A G T C C G T A A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

TEAD1/MA0090.2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CATYCTTTCA
CACATTCCAT--
 A C G T A C G T A G T C G T C A C G A T A G T C G T A C A G C T A C G T C G A T A G T C C G T A
G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATYCTTTCA
TCAGTCTT---
 A C G T A G T C G T C A C G A T A G T C G T A C A G C T A C G T C G A T A G T C C G T A
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CATYCTTTCA-
GATAACATCCTAGTAG
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G A T A G T C G T A C A G C T A C G T C G A T A G T C C G T A A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

TEAD4/MA0809.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CATYCTTTCA
CACATTCCAT--
 A C G T A C G T A G T C G T C A C G A T A G T C G T A C A G C T A C G T C G A T A G T C C G T A
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CATYCTTTCA-----
-TNCCTTTGATCTTN
 A G T C G T C A C G A T A G T C G T A C A G C T A C G T C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CATYCTTTCA--
--TGGTTTCAGT
 A G T C G T C A C G A T A G T C G T A C A G C T A C G T C G A T A G T C C G T A A C G T A C G T
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CATYCTTTCA--
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G A T A G T C G T A C A G C T A C G T C G A T A G T C C G T A A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CATYCTTTCA---
---CCTTTGATGT
 A G T C G T C A C G A T A G T C G T A C A G C T A C G T C G A T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CATYCTTTCA------
NNTTCCTTTGATCTANA
 A C G T A G T C G T C A C G A T A G T C G T A C A G C T A C G T C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A