p-value: | 1e-7 |
log p-value: | -1.680e+01 |
Information Content per bp: | 1.637 |
Number of Target Sequences with motif | 33.0 |
Percentage of Target Sequences with motif | 3.79% |
Number of Background Sequences with motif | 589.0 |
Percentage of Background Sequences with motif | 1.27% |
Average Position of motif in Targets | 59.2 +/- 20.3bp |
Average Position of motif in Background | 49.7 +/- 29.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.7 |
Multiplicity (# of sites on avg that occur together) | 1.03 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.96 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTTCCATGGCAAC- TTGCCATGGCAACC |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 2 |
Score: | 0.96 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTTCCATGGCAAC- TTGCCATGGCAACN |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 3 |
Score: | 0.92 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTTCCATGGCAAC- GTTGCCATGGCAACM |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 4 |
Score: | 0.91 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTTCCATGGCAAC GTTGCCATGGCAAC |
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RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 5 |
Score: | 0.90 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTCCATGGCAAC-- GTTGCCATGGCAACCG |
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RFX3/MA0798.1/Jaspar
Match Rank: | 6 |
Score: | 0.89 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTTCCATGGCAAC- CGTTGCCATGGCAACG |
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RFX2/MA0600.2/Jaspar
Match Rank: | 7 |
Score: | 0.89 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTTCCATGGCAAC- CGTTGCCATGGCAACG |
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RFX5/MA0510.2/Jaspar
Match Rank: | 8 |
Score: | 0.89 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTTCCATGGCAAC- NGTTGCCATGGCAACG |
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RFX4/MA0799.1/Jaspar
Match Rank: | 9 |
Score: | 0.88 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTTCCATGGCAAC- CGTTGCCATGGCAACG |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 10 |
Score: | 0.74 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTTCCATGGCAAC--- -TACCATAGCAACGGT |
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