Information for 4-TTWTCWCYTCMCTGGT (Motif 11)

A G C T G A C T G C T A A G C T A G T C C G T A A G T C A G T C A C G T T A G C G T A C G A T C A C G T A T C G A C T G C A G T
Reverse Opposite:
G C T A T G A C A T G C C G T A C A T G A C T G A T C G C G T A C T A G C T A G G C A T C T A G C T G A C G A T C T G A T C G A
p-value:1e-12
log p-value:-2.823e+01
Information Content per bp:1.699
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.3 +/- 21.3bp
Average Position of motif in Background47.8 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTWTCWCYTCMCTGGT
GTTTCACTTCCG----
 A G C T G A C T G C T A A G C T A G T C C G T A A G T C A G T C A C G T T A G C G T A C G A T C A C G T A T C G A C T G C A G T
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTWTCWCYTCMCTGGT
ASTTTCACTTCC-----
 A C G T A G C T G A C T G C T A A G C T A G T C C G T A A G T C A G T C A C G T T A G C G T A C G A T C A C G T A T C G A C T G C A G T
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C A C G T A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTWTCWCYTCMCTGGT
ATTAACACCT-------
 A C G T A G C T G A C T G C T A A G C T A G T C C G T A A G T C A G T C A C G T T A G C G T A C G A T C A C G T A T C G A C T G C A G T
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTWTCWCYTCMCTGGT
ASTTTCASTTYC-----
 A C G T A G C T G A C T G C T A A G C T A G T C C G T A A G T C A G T C A C G T T A G C G T A C G A T C A C G T A T C G A C T G C A G T
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TTWTCWCYTCMCTGGT----
NTTMRCACNNNVSTGYKAANT
 A C G T A G C T G A C T G C T A A G C T A G T C C G T A A G T C A G T C A C G T T A G C G T A C G A T C A C G T A T C G A C T G C A G T A C G T A C G T A C G T A C G T
G C A T A G C T G A C T T G C A C T G A T A G C C T G A A T G C G A T C A G C T T G C A T C A G A T C G G A C T T A C G G A C T A C T G C T G A C T G A G C T A G C A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TTWTCWCYTCMCTGGT
---NNACTTGCCTT--
 A G C T G A C T G C T A A G C T A G T C C G T A A G T C A G T C A C G T T A G C G T A C G A T C A C G T A T C G A C T G C A G T
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TTWTCWCYTCMCTGGT----
TTTMCGCTTSABTGAACACN
 A G C T G A C T G C T A A G C T A G T C C G T A A G T C A G T C A C G T T A G C G T A C G A T C A C G T A T C G A C T G C A G T A C G T A C G T A C G T A C G T
A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

SREBF1/MA0595.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TTWTCWCYTCMCTGGT
--ATCACCCCAC----
 A G C T G A C T G C T A A G C T A G T C C G T A A G T C A G T C A C G T T A G C G T A C G A T C A C G T A T C G A C T G C A G T
A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TTWTCWCYTCMCTGGT
GTCATGCHTGRCTGS-
 A G C T G A C T G C T A A G C T A G T C C G T A A G T C A G T C A C G T T A G C G T A C G A T C A C G T A T C G A C T G C A G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TTWTCWCYTCMCTGGT
CTATCCCCGCCCTATT
 A G C T G A C T G C T A A G C T A G T C C G T A A G T C A G T C A C G T T A G C G T A C G A T C A C G T A T C G A C T G C A G T
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T