Information for 5-CACAGCTCCCTCT (Motif 6)

A G T C G T C A A G T C G T C A A C T G A G T C A C G T G T A C A G T C A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G A C T G A C T G T C G A A C T G A G T C A C G T A C T G A C G T A C T G
p-value:1e-13
log p-value:-3.222e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.2 +/- 28.1bp
Average Position of motif in Background56.3 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CACAGCTCCCTCT
CACAGN-------
 A G T C G T C A A G T C G T C A A C T G A G T C A C G T G T A C A G T C A G T C A C G T A G T C A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACAGCTCCCTCT
CCCCCGCCCCCGCC
 A C G T A G T C G T C A A G T C G T C A A C T G A G T C A C G T G T A C A G T C A G T C A C G T A G T C A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CACAGCTCCCTCT--
-TCCGCCCCCGCATT
 A G T C G T C A A G T C G T C A A C T G A G T C A C G T G T A C A G T C A G T C A C G T A G T C A C G T A C G T A C G T
A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CACAGCTCCCTCT
----GCTCCG---
 A G T C G T C A A G T C G T C A A C T G A G T C A C G T G T A C A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CACAGCTCCCTCT--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A G T C G T C A A G T C G T C A A C T G A G T C A C G T G T A C A G T C A G T C A C G T A G T C A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CACAGCTCCCTCT------
CNNBRGCGCCCCCTGSTGGC
 A C G T A G T C G T C A A G T C G T C A A C T G A G T C A C G T G T A C A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CACAGCTCCCTCT
CGCAGCTGCG---
 A G T C G T C A A G T C G T C A A C T G A G T C A C G T G T A C A G T C A G T C A C G T A G T C A C G T
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CACAGCTCCCTCT
GGACACACCCCC----
 A C G T A C G T A C G T A G T C G T C A A G T C G T C A A C T G A G T C A C G T G T A C A G T C A G T C A C G T A G T C A C G T
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CACAGCTCCCTCT
GGCCCCGCCCCC---
 A C G T A C G T A G T C G T C A A G T C G T C A A C T G A G T C A C G T G T A C A G T C A G T C A C G T A G T C A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CACAGCTCCCTCT
GCTCCGCCCMCY--
 A C G T A G T C G T C A A G T C G T C A A C T G A G T C A C G T G T A C A G T C A G T C A C G T A G T C A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T