Information for 15-CCAYAKMGAG (Motif 23)

A G T C G T A C G T C A A G C T G T C A A C G T G T C A C T A G C G T A A C T G
Reverse Opposite:
G T A C C G A T A G T C A C G T T G C A A C G T T C G A A C G T A C T G C T A G
p-value:1e-4
log p-value:-1.055e+01
Information Content per bp:1.793
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif333.6
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets46.9 +/- 27.0bp
Average Position of motif in Background51.3 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0008.1_MADS_class/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCAYAKMGAG
CCATATATGG
 A G T C G T A C G T C A A G C T G T C A A C G T G T C A C T A G C G T A A C T G
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCAYAKMGAG
NWAACCACADNN--
 A C G T A C G T A C G T A C G T A G T C G T A C G T C A A G C T G T C A A C G T G T C A C T A G C G T A A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCAYAKMGAG
AAACCACAGAN--
 A C G T A C G T A C G T A G T C G T A C G T C A A G C T G T C A A C G T G T C A C T A G C G T A A C T G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCAYAKMGAG
AAACCACAGC---
 A C G T A C G T A C G T A G T C G T A C G T C A A G C T G T C A A C G T G T C A C T A G C G T A A C T G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCAYAKMGAG
AAACCACANN---
 A C G T A C G T A C G T A G T C G T A C G T C A A G C T G T C A A C G T G T C A C T A G C G T A A C T G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T

SRF/MA0083.3/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCAYAKMGAG---
TGACCATATATGGTCA
 A C G T A C G T A C G T A G T C G T A C G T C A A G C T G T C A A C G T G T C A C T A G C G T A A C T G A C G T A C G T A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCAYAKMGAG
TNCCATATATGG
 A C G T A C G T A G T C G T A C G T C A A G C T G T C A A C G T G T C A C T A G C G T A A C T G
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCAYAKMGAG-
KCCAAAAATAGC
 A C G T A G T C G T A C G T C A A G C T G T C A A C G T G T C A C T A G C G T A A C T G A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCAYAKMGAG
NAAACCACAG----
 A C G T A C G T A C G T A C G T A G T C G T A C G T C A A G C T G T C A A C G T G T C A C T A G C G T A A C T G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCAYAKMGAG------
-TTGACCGAGAATTCC
 A G T C G T A C G T C A A G C T G T C A A C G T G T C A C T A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C