Information for 11-GTGKTKTWTGAAR (Motif 15)

A C T G G A C T A C T G A C T G A C G T A C G T A C G T C G A T A C G T A C T G C G T A C G T A C T G A
Reverse Opposite:
A G C T A C G T A C G T A G T C C G T A C G T A C G T A G T C A C G T A G T A C A G T C C G T A A G T C
p-value:1e-10
log p-value:-2.447e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.2 +/- 15.7bp
Average Position of motif in Background57.9 +/- 2.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:GTGKTKTWTGAAR---
------TTTGAAACCG
 A C T G G A C T A C T G A C T G A C G T A C G T A C G T C G A T A C G T A C T G C G T A C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTGKTKTWTGAAR
NNTGTGGTTT------
 A C G T A C G T A C G T A C T G G A C T A C T G A C T G A C G T A C G T A C G T C G A T A C G T A C T G C G T A C G T A C T G A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GTGKTKTWTGAAR-
-----ATTTGAATT
 A C T G G A C T A C T G A C T G A C G T A C G T A C G T C G A T A C G T A C T G C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTGKTKTWTGAAR
GCTGTGGTTT------
 A C G T A C G T A C G T A C T G G A C T A C T G A C T G A C G T A C G T A C G T C G A T A C G T A C T G C G T A C G T A C T G A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GTGKTKTWTGAAR
NNHTGTGGTTWN-----
 A C G T A C G T A C G T A C G T A C T G G A C T A C T G A C T G A C G T A C G T A C G T C G A T A C G T A C T G C G T A C G T A C T G A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTGKTKTWTGAAR
CTGTGGTTTN-----
 A C G T A C G T A C T G G A C T A C T G A C T G A C G T A C G T A C G T C G A T A C G T A C T G C G T A C G T A C T G A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTGKTKTWTGAAR
GTCTGTGGTTT------
 A C G T A C G T A C G T A C G T A C T G G A C T A C T G A C T G A C G T A C G T A C G T C G A T A C G T A C T G C G T A C G T A C T G A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTGKTKTWTGAAR
NTNTTGTTGTTTGTN-
 A C G T A C G T A C G T A C T G G A C T A C T G A C T G A C G T A C G T A C G T C G A T A C G T A C T G C G T A C G T A C T G A
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GTGKTKTWTGAAR------
--NTTNTATGAATGTGNNC
 A C T G G A C T A C T G A C T G A C G T A C G T A C G T C G A T A C G T A C T G C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTGKTKTWTGAAR
-DGWTTTATGRCN
 A C T G G A C T A C T G A C T G A C G T A C G T A C G T C G A T A C G T A C T G C G T A C G T A C T G A
A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C