Information for 11-TTATGAGTAT (Motif 12)

A C G T A C G T T C G A A C G T A T C G C G T A C T A G A C G T C T G A C G A T
Reverse Opposite:
C G T A G A C T C G T A A G T C A C G T A T G C G T C A A G C T C G T A C G T A
p-value:1e-10
log p-value:-2.525e+01
Information Content per bp:1.859
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif51.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets58.8 +/- 24.9bp
Average Position of motif in Background48.1 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------TTATGAGTAT-
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A T C G C G T A C T A G A C G T C T G A C G A T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

PH0068.1_Hoxc13/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TTATGAGTAT-
NAATTTTACGAGNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A T C G C G T A C T A G A C G T C T G A C G A T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTATGAGTAT--
--ATGAATATTC
 A C G T A C G T T C G A A C G T A T C G C G T A C T A G A C G T C T G A C G A T A C G T A C G T
A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTATGAGTAT-
ANATTTTACGAGNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A T C G C G T A C T A G A C G T C T G A C G A T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTATGAGTAT
TTTTATKRGG--
 A C G T A C G T A C G T A C G T T C G A A C G T A T C G C G T A C T A G A C G T C T G A C G A T
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTATGAGTAT---
NNTATANATATACN
 A C G T A C G T A C G T T C G A A C G T A T C G C G T A C T A G A C G T C T G A C G A T A C G T A C G T A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTATGAGTAT
NTTTTACGAGN--
 A C G T A C G T A C G T A C G T A C G T T C G A A C G T A T C G C G T A C T A G A C G T C T G A C G A T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTATGAGTAT----
CTCATGAATATTCAT
 A C G T A C G T A C G T T C G A A C G T A T C G C G T A C T A G A C G T C T G A C G A T A C G T A C G T A C G T A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTATGAGTAT--
--ATGMATATDC
 A C G T A C G T T C G A A C G T A T C G C G T A C T A G A C G T C T G A C G A T A C G T A C G T
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTATGAGTAT
NNTNTCATGAATGT
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A T C G C G T A C T A G A C G T C T G A C G A T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T