Information for 18-TTGGAGAGCGGGG (Motif 18)

A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C C A T G A C T G A T C G A C T G
Reverse Opposite:
A G T C A T G C A G T C G A T C A C T G A G T C A C G T A G T C A C G T A G T C A G T C C G T A C G T A
p-value:1e-8
log p-value:-1.943e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.8 +/- 32.3bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTGGAGAGCGGGG
BTBRAGTGSN---
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C C A T G A C T G A T C G A C T G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTGGAGAGCGGGG
CTYRAGTGSY---
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C C A T G A C T G A T C G A C T G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTGGAGAGCGGGG
-TTGAGTGSTT--
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C C A T G A C T G A T C G A C T G
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TTGGAGAGCGGGG
GGTTAGAGACCT---
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C C A T G A C T G A T C G A C T G
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TTGGAGAGCGGGG
GTGGGGGAGGGG--
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C C A T G A C T G A T C G A C T G
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TTGGAGAGCGGGG-
--RGKGGGCGGAGC
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C C A T G A C T G A T C G A C T G A C G T
A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TTGGAGAGCGGGG--
---GGGGGCGGGGCC
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C C A T G A C T G A T C G A C T G A C G T A C G T
A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TTGGAGAGCGGGG-
--RGKGGGCGKGGC
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C C A T G A C T G A T C G A C T G A C G T
A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TTGGAGAGCGGGG
-----CAGCC---
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C C A T G A C T G A T C G A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TTGGAGAGCGGGG-
GATATTGACAGCTGCGT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C C A T G A C T G A T C G A C T G A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T