Information for 11-AGCTGCAATT (Motif 17)

C G T A A C T G A T G C G C A T C A T G G A T C G C T A G C T A G C A T A C G T
Reverse Opposite:
T G C A C G T A C G A T C G A T C T A G G T A C C G T A T A C G T G A C G C A T
p-value:1e-8
log p-value:-1.856e+01
Information Content per bp:1.585
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif99.0
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets47.4 +/- 26.1bp
Average Position of motif in Background49.2 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------AGCTGCAATT-
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T G C G C A T C A T G G A T C G C T A G C T A G C A T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGCTGCAATT
NNACAGCTGC----
 A C G T A C G T A C G T A C G T C G T A A C T G A T G C G C A T C A T G G A T C G C T A G C T A G C A T A C G T
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGCAATT
CAGCAGCTGN----
 A C G T A C G T A C G T A C G T C G T A A C T G A T G C G C A T C A T G G A T C G C T A G C T A G C A T A C G T
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------AGCTGCAATT
NGNGACAGCTGCN---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T G C G C A T C A T G G A T C G C T A G C T A G C A T A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCAATT
AGCAGCTGCT---
 A C G T A C G T A C G T C G T A A C T G A T G C G C A T C A T G G A T C G C T A G C T A G C A T A C G T
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCAATT
AACAGCTGCAG--
 A C G T A C G T A C G T C G T A A C T G A T G C G C A T C A T G G A T C G C T A G C T A G C A T A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCAATT
GACAGCTGCAG--
 A C G T A C G T A C G T C G T A A C T G A T G C G C A T C A T G G A T C G C T A G C T A G C A T A C G T
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AGCTGCAATT
NNAGCAGCTGCT---
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T G C G C A T C A T G G A T C G C T A G C T A G C A T A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGCTGCAATT
CAGCTGNT---
 A C G T C G T A A C T G A T G C G C A T C A T G G A T C G C T A G C T A G C A T A C G T
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AGCTGCAATT
NNVVCAGCTGBN---
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T G C G C A T C A T G G A T C G C T A G C T A G C A T A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T