Information for 8-TGAAACATGC (Motif 8)

C G A T A T C G C T G A G C T A C T G A A G T C C G T A A C G T C T A G A G T C
Reverse Opposite:
A C T G G A T C C G T A G A C T C T A G A G C T C G A T A G C T T A G C C G T A
p-value:1e-11
log p-value:-2.713e+01
Information Content per bp:1.833
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif91.5
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets49.3 +/- 28.2bp
Average Position of motif in Background52.4 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes2/MA0616.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGAAACATGC
TAACGACACGTGC
 A C G T A C G T A C G T C G A T A T C G C T G A G C T A C T G A A G T C C G T A A C G T C T A G A G T C
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGAAACATGC
ACTGAAACCA--
 A C G T A C G T C G A T A T C G C T G A G C T A C T G A A G T C C G T A A C G T C T A G A G T C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGAAACATGC
NTTGATACATT-
 A C G T A C G T C G A T A T C G C T G A G C T A C T G A A G T C C G T A A C G T C T A G A G T C
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGAAACATGC
--RTACGTGC
 C G A T A T C G C T G A G C T A C T G A A G T C C G T A A C G T C T A G A G T C
A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

HEY2/MA0649.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGAAACATGC-
-GACACGTGCC
 C G A T A T C G C T G A G C T A C T G A A G T C C G T A A C G T C T A G A G T C A C G T
A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGAAACATGC--
TGAATTATGCAT
 C G A T A T C G C T G A G C T A C T G A A G T C C G T A A C G T C T A G A G T C A C G T A C G T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

HES5/MA0821.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGAAACATGC--
CGGCACGTGCCA
 C G A T A T C G C T G A G C T A C T G A A G T C C G T A A C G T C T A G A G T C A C G T A C G T
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

PB0146.1_Mafk_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGAAACATGC----
GAAAAAATTGCAAGG
 A C G T C G A T A T C G C T G A G C T A C T G A A G T C C G T A A C G T C T A G A G T C A C G T A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGAAACATGC---
-GWAAYHTGABMC
 C G A T A T C G C T G A G C T A C T G A A G T C C G T A A C G T C T A G A G T C A C G T A C G T A C G T
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGAAACATGC
GGGTACGTGC
 C G A T A T C G C T G A G C T A C T G A A G T C C G T A A C G T C T A G A G T C
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C