Information for 11-GCAACCGGAGAAA (Motif 13)

A C T G A G T C C G T A C G T A A G T C A T G C T A C G A C T G C G T A A C T G C G T A G T C A G T C A
Reverse Opposite:
A C G T A C G T A C G T A G T C A C G T A G T C A T G C A T C G A C T G C G A T A C G T A C T G A G T C
p-value:1e-9
log p-value:-2.257e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.3 +/- 35.7bp
Average Position of motif in Background72.0 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETV2/MA0762.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCAACCGGAGAAA
--AACCGGAAATA
 A C T G A G T C C G T A C G T A A G T C A T G C T A C G A C T G C G T A A C T G C G T A G T C A G T C A
A C G T A C G T C T G A T C G A T A G C T G A C A C T G A C T G C G T A G C T A T C G A A G C T C T G A

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCAACCGGAGAAA
ATGCAACAGGTGG--
 A C G T A C G T A C T G A G T C C G T A C G T A A G T C A T G C T A C G A C T G C G T A A C T G C G T A G T C A G T C A
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCAACCGGAGAAA
GWAAYHTGAKMC-
 A C T G A G T C C G T A C G T A A G T C A T G C T A C G A C T G C G T A A C T G C G T A G T C A G T C A
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCAACCGGAGAAA---
-GNNACCGAGAATNNN
 A C T G A G T C C G T A C G T A A G T C A T G C T A C G A C T G C G T A A C T G C G T A G T C A G T C A A C G T A C G T A C G T
A C G T A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

SCRT1/MA0743.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCAACCGGAGAAA
GAGCAACAGGTGGTT
 A C G T A C G T A C T G A G T C C G T A C G T A A G T C A T G C T A C G A C T G C G T A A C T G C G T A G T C A G T C A
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------GCAACCGGAGAAA
CCGCATAGCAACGGA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A G T C A T G C T A C G A C T G C G T A A C T G C G T A G T C A G T C A
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.53
Offset:-11
Orientation:forward strand
Alignment:-----------GCAACCGGAGAAA
TGTGACCCTTAGCAACCGATTAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A G T C A T G C T A C G A C T G C G T A A C T G C G T A G T C A G T C A
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GCAACCGGAGAAA-
----CSTGGGAAAD
 A C T G A G T C C G T A C G T A A G T C A T G C T A C G A C T G C G T A A C T G C G T A G T C A G T C A A C G T
A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCAACCGGAGAAA
--TTCCKNAGAA-
 A C T G A G T C C G T A C G T A A G T C A T G C T A C G A C T G C G T A A C T G C G T A G T C A G T C A
A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCAACCGGAGAAA-
GTACATCCGGATTTTT
 A C G T A C G T A C T G A G T C C G T A C G T A A G T C A T G C T A C G A C T G C G T A A C T G C G T A G T C A G T C A A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T