Information for 12-TTCTTTGTCTGACCAC (Motif 18)

A C G T A G C T G A T C A C G T A G C T A C G T A T C G A C G T G T A C A C G T A T C G C G T A A G T C A G T C G T C A G A T C
Reverse Opposite:
C A T G A C G T A C T G T A C G A C G T T A G C C G T A C A T G T G C A T A G C T C G A C T G A C G T A C T A G T C G A G T C A
p-value:1e-10
log p-value:-2.411e+01
Information Content per bp:1.693
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif24.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets47.5 +/- 23.4bp
Average Position of motif in Background54.3 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:TTCTTTGTCTGACCAC-
---------TGACCYCT
 A C G T A G C T G A T C A C G T A G C T A C G T A T C G A C G T G T A C A C G T A T C G C G T A A G T C A G T C G T C A G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTCTTTGTCTGACCAC
ANTCCTTTGTCTNNNN--
 A C G T A C G T A C G T A G C T G A T C A C G T A G C T A C G T A T C G A C G T G T A C A C G T A T C G C G T A A G T C A G T C G T C A G A T C
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.58
Offset:9
Orientation:reverse strand
Alignment:TTCTTTGTCTGACCAC
---------TGACCT-
 A C G T A G C T G A T C A C G T A G C T A C G T A T C G A C G T G T A C A C G T A T C G C G T A A G T C A G T C G T C A G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TTCTTTGTCTGACCAC-----
----TGTCGTGACCCCTTAAT
 A C G T A G C T G A T C A C G T A G C T A C G T A T C G A C G T G T A C A C G T A T C G C G T A A G T C A G T C G T C A G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TTCTTTGTCTGACCAC-----
----NNNNTTGACCCCTNNNN
 A C G T A G C T G A T C A C G T A G C T A C G T A T C G A C G T G T A C A C G T A T C G C G T A A G T C A G T C G T C A G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:TTCTTTGTCTGACCAC-
---------TGACCTYA
 A C G T A G C T G A T C A C G T A G C T A C G T A T C G A C G T G T A C A C G T A T C G C G T A A G T C A G T C G T C A G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TTCTTTGTCTGACCAC
----TWGTCTGV----
 A C G T A G C T G A T C A C G T A G C T A C G T A T C G A C G T G T A C A C G T A T C G C G T A A G T C A G T C G T C A G A T C
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.53
Offset:8
Orientation:forward strand
Alignment:TTCTTTGTCTGACCAC----
--------NWAACCACADNN
 A C G T A G C T G A T C A C G T A G C T A C G T A T C G A C G T G T A C A C G T A T C G C G T A A G T C A G T C G T C A G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TTCTTTGTCTGACCAC-----
-----NNNNTGACCCGGCGCG
 A C G T A G C T G A T C A C G T A G C T A C G T A T C G A C G T G T A C A C G T A T C G C G T A A G T C A G T C G T C A G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.53
Offset:8
Orientation:forward strand
Alignment:TTCTTTGTCTGACCAC--
--------NAAACCACAG
 A C G T A G C T G A T C A C G T A G C T A C G T A T C G A C G T G T A C A C G T A T C G C G T A A G T C A G T C G T C A G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G