Information for 3-KMTCAGTSGWGWGTTK (Motif 7)

A C G T G T A C A C G T A G T C C G T A A C T G A C G T A T C G A C T G C G T A A C T G C G A T A C T G A C G T A C G T A C T G
Reverse Opposite:
T G A C C G T A C G T A G T A C C G T A A G T C C G A T A G T C A T G C G T C A A G T C A C G T A C T G C G T A A C T G G T C A
p-value:1e-13
log p-value:-3.135e+01
Information Content per bp:1.848
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.7 +/- 29.0bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:KMTCAGTSGWGWGTTK
-----GTGGAT-----
 A C G T G T A C A C G T A G T C C G T A A C T G A C G T A T C G A C T G C G T A A C T G C G A T A C T G A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:KMTCAGTSGWGWGTTK
-TTAAGTGGT------
 A C G T G T A C A C G T A G T C C G T A A C T G A C G T A T C G A C T G C G T A A C T G C G A T A C T G A C G T A C G T A C T G
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.50
Offset:2
Orientation:forward strand
Alignment:KMTCAGTSGWGWGTTK
--TCAGTCTT------
 A C G T G T A C A C G T A G T C C G T A A C T G A C G T A T C G A C T G C G T A A C T G C G A T A C T G A C G T A C G T A C T G
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---KMTCAGTSGWGWGTTK
NTNNTTAAGTGGTTANN--
 A C G T A C G T A C G T A C G T G T A C A C G T A G T C C G T A A C T G A C G T A T C G A C T G C G T A A C T G C G A T A C T G A C G T A C G T A C T G
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:KMTCAGTSGWGWGTTK
-----ATGGGGTGAT-
 A C G T G T A C A C G T A G T C C G T A A C T G A C G T A T C G A C T G C G T A A C T G C G A T A C T G A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.50
Offset:5
Orientation:forward strand
Alignment:KMTCAGTSGWGWGTTK
-----BTBRAGTGSN-
 A C G T G T A C A C G T A G T C C G T A A C T G A C G T A T C G A C T G C G T A A C T G C G A T A C T G A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:KMTCAGTSGWGWGTTK
-----CTYRAGTGSY-
 A C G T G T A C A C G T A G T C C G T A A C T G A C G T A T C G A C T G C G T A A C T G C G A T A C T G A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:KMTCAGTSGWGWGTTK
-TTAAGTGGN------
 A C G T G T A C A C G T A G T C C G T A A C T G A C G T A T C G A C T G C G T A A C T G C G A T A C T G A C G T A C G T A C T G
A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:KMTCAGTSGWGWGTTK
------TTGAGTGSTT
 A C G T G T A C A C G T A G T C C G T A A C T G A C G T A T C G A C T G C G T A A C T G C G A T A C T G A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:KMTCAGTSGWGWGTTK
NCGCAGCGGGGGGTC-
 A C G T G T A C A C G T A G T C C G T A A C T G A C G T A T C G A C T G C G T A A C T G C G A T A C T G A C G T A C G T A C T G
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T