Information for 8-AATCCCCTTTGTG (Motif 11)

G T C A G T C A A C G T A G T C A G T C A G T C A G T C A G C T A C G T A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A C G T A C T G A A C T G A C T G A C T G T C A G C G T A A C G T A C G T
p-value:1e-11
log p-value:-2.543e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.4 +/- 20.8bp
Average Position of motif in Background79.6 +/- 5.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.70
Offset:5
Orientation:forward strand
Alignment:AATCCCCTTTGTG
-----CCTTTGTT
 G T C A G T C A A C G T A G T C A G T C A G T C A G T C A G C T A C G T A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AATCCCCTTTGTG----
TGTTCCCATTGTGTACT
 G T C A G T C A A C G T A G T C A G T C A G T C A G T C A G C T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.67
Offset:5
Orientation:forward strand
Alignment:AATCCCCTTTGTG
-----CCWTTGTY
 G T C A G T C A A C G T A G T C A G T C A G T C A G T C A G C T A C G T A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.67
Offset:5
Orientation:forward strand
Alignment:AATCCCCTTTGTG--
-----CCWTTGTYYB
 G T C A G T C A A C G T A G T C A G T C A G T C A G T C A G C T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AATCCCCTTTGTG
AGGVNCCTTTGT-
 G T C A G T C A A C G T A G T C A G T C A G T C A G T C A G C T A C G T A C G T A C T G A C G T A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.66
Offset:5
Orientation:forward strand
Alignment:AATCCCCTTTGTG--
-----CCTTTGTTTT
 G T C A G T C A A C G T A G T C A G T C A G T C A G T C A G C T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PH0121.1_Obox1/Jaspar

Match Rank:7
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------AATCCCCTTTGTG
NTAGTTAATCCCCTTAN--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A A C G T A G T C A G T C A G T C A G T C A G C T A C G T A C G T A C T G A C G T A C T G
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AATCCCCTTTGTG
CTAATCCTCTT----
 A C G T A C G T G T C A G T C A A C G T A G T C A G T C A G T C A G T C A G C T A C G T A C G T A C T G A C G T A C T G
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.65
Offset:6
Orientation:forward strand
Alignment:AATCCCCTTTGTG
------CTTTGT-
 G T C A G T C A A C G T A G T C A G T C A G T C A G T C A G C T A C G T A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AATCCCCTTTGTG----
--NNNCCATTGTGTNAN
 G T C A G T C A A C G T A G T C A G T C A G T C A G T C A G C T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G