Information for 8-GCGGAGCTGAGGAGTC (Motif 8)

A C T G G T A C A C T G A C T G C G T A C A T G A G T C A C G T C T A G C G T A A T C G C T A G G T C A T A C G A C G T G T A C
Reverse Opposite:
A C T G T C G A A G T C A C G T A G T C A T G C G A C T A G T C C G T A A C T G G T A C A C G T A G T C G T A C A C T G A G T C
p-value:1e-12
log p-value:-2.962e+01
Information Content per bp:1.779
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets60.5 +/- 27.3bp
Average Position of motif in Background43.0 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCGGAGCTGAGGAGTC
-CGGAGC---------
 A C T G G T A C A C T G A C T G C G T A C A T G A G T C A C G T C T A G C G T A A T C G C T A G G T C A T A C G A C G T G T A C
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCGGAGCTGAGGAGTC
-CGCAGCTGCG-----
 A C T G G T A C A C T G A C T G C G T A C A T G A G T C A C G T C T A G C G T A A T C G C T A G G T C A T A C G A C G T G T A C
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCGGAGCTGAGGAGTC
AGCGGAAGTG-------
 A C G T A C T G G T A C A C T G A C T G C G T A C A T G A G T C A C G T C T A G C G T A A T C G C T A G G T C A T A C G A C G T G T A C
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCGGAGCTGAGGAGTC
RGKGGGCGGAGC---------
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C A C T G A C T G C G T A C A T G A G T C A C G T C T A G C G T A A T C G C T A G G T C A T A C G A C G T G T A C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCGGAGCTGAGGAGTC
ACCGGAAGTG-------
 A C G T A C T G G T A C A C T G A C T G C G T A C A T G A G T C A C G T C T A G C G T A A T C G C T A G G T C A T A C G A C G T G T A C
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:6
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GCGGAGCTGAGGAGTC
TTAAGAGGAAGTTA------
 A C G T A C G T A C G T A C G T A C T G G T A C A C T G A C T G C G T A C A T G A G T C A C G T C T A G C G T A A T C G C T A G G T C A T A C G A C G T G T A C
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCGGAGCTGAGGAGTC
NCGCGGACGTTG------
 A C G T A C G T A C T G G T A C A C T G A C T G C G T A C A T G A G T C A C G T C T A G C G T A A T C G C T A G G T C A T A C G A C G T G T A C
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GCGGAGCTGAGGAGTC
AGGGGGCGGGGCTG-------
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C A C T G A C T G C G T A C A T G A G T C A C G T C T A G C G T A A T C G C T A G G T C A T A C G A C G T G T A C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GCGGAGCTGAGGAGTC
AAAGRGGAAGTG-------
 A C G T A C G T A C G T A C T G G T A C A C T G A C T G C G T A C A T G A G T C A C G T C T A G C G T A A T C G C T A G G T C A T A C G A C G T G T A C
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GCGGAGCTGAGGAGTC
NNNNAGCAGCTGCTGAN--
 A C G T A C G T A C G T A C T G G T A C A C T G A C T G C G T A C A T G A G T C A C G T C T A G C G T A A T C G C T A G G T C A T A C G A C G T G T A C
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T