Information for 14-TGCGTCCGTGTGACAT (Motif 23)

A C G T A C T G A G T C A T C G A C G T G A T C A G T C C T A G A C G T C T A G A G C T A C T G G T C A A G T C T C G A A C G T
Reverse Opposite:
C G T A A G C T A C T G A C G T T A G C C T G A A G T C T C G A G A T C A C T G C A T G C G T A A T G C C T A G A G T C C G T A
p-value:1e-7
log p-value:-1.698e+01
Information Content per bp:1.741
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets31.0 +/- 20.7bp
Average Position of motif in Background52.8 +/- 44.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGCGTCCGTGTGACAT
----RTCATGTGAC--
 A C G T A C T G A G T C A T C G A C G T G A T C A G T C C T A G A C G T C T A G A G C T A C T G G T C A A G T C T C G A A C G T
A C G T A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:2
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TGCGTCCGTGTGACAT---
------CNNTTGACCTTTG
 A C G T A C T G A G T C A T C G A C G T G A T C A G T C C T A G A C G T C T A G A G C T A C T G G T C A A G T C T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PPARG/MA0066.1/Jaspar

Match Rank:3
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TGCGTCCGTGTGACAT--
AGTAGGTCACNGTGACCTAC
 A C G T A C G T A C G T A C T G A G T C A T C G A C G T G A T C A G T C C T A G A C G T C T A G A G C T A C T G G T C A A G T C T C G A A C G T A C G T A C G T
G C T A A T C G C A G T C T G A C T A G A C T G C A G T A T G C G T C A G A T C T A G C A C T G C A G T A T C G T G C A G A T C A T G C A G C T C G T A A T G C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGCGTCCGTGTGACAT
TTGCGTGCVA-------
 A C G T A C G T A C T G A G T C A T C G A C G T G A T C A G T C C T A G A C G T C T A G A G C T A C T G G T C A A G T C T C G A A C G T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.50
Offset:4
Orientation:forward strand
Alignment:TGCGTCCGTGTGACAT
----KCCACGTGAC--
 A C G T A C T G A G T C A T C G A C G T G A T C A G T C C T A G A C G T C T A G A G C T A C T G G T C A A G T C T C G A A C G T
A C G T A C G T A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:TGCGTCCGTGTGACAT
-----NCACGTGACN-
 A C G T A C T G A G T C A T C G A C G T G A T C A G T C C T A G A C G T C T A G A G C T A C T G G T C A A G T C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

Crem/MA0609.1/Jaspar

Match Rank:7
Score:0.50
Offset:8
Orientation:forward strand
Alignment:TGCGTCCGTGTGACAT--
--------TATGACGTAA
 A C G T A C T G A G T C A T C G A C G T G A T C A G T C C T A G A C G T C T A G A G C T A C T G G T C A A G T C T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C T G C G T A A G T C A C T G A C G T G T C A C G T A

Atf1/MA0604.1/Jaspar

Match Rank:8
Score:0.49
Offset:9
Orientation:forward strand
Alignment:TGCGTCCGTGTGACAT-
---------ATGACGTA
 A C G T A C T G A G T C A T C G A C G T G A T C A G T C C T A G A C G T C T A G A G C T A C T G G T C A A G T C T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TGCGTCCGTGTGACAT-
TGACCTTTCGTGACCTT
 A C G T A C T G A G T C A T C G A C G T G A T C A G T C C T A G A C G T C T A G A G C T A C T G G T C A A G T C T C G A A C G T A C G T
A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T

ESR2/MA0258.2/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TGCGTCCGTGTGACAT
-AGGNCANNGTGACCT
 A C G T A C T G A G T C A T C G A C G T G A T C A G T C C T A G A C G T C T A G A G C T A C T G G T C A A G T C T C G A A C G T
A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T