Information for 9-CGCCCTCCTGCAGGGG (Motif 12)

G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A A T C G A T C G A C T G A T C G
Reverse Opposite:
A T G C A G T C A T G C A T G C A C G T A C T G A G T C C G T A A C T G A C T G G T C A A C T G C T A G C T A G T G A C A C T G
p-value:1e-11
log p-value:-2.588e+01
Information Content per bp:1.861
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.5 +/- 19.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGCCCTCCTGCAGGGG
-GGCCYCCTGCTGDGH
 G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A A T C G A T C G A C T G A T C G
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CGCCCTCCTGCAGGGG
---CCCCCTGCTGTG-
 G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A A T C G A T C G A C T G A T C G
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CGCCCTCCTGCAGGGG--
---TCNCCTGCTGNGNNN
 G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A A T C G A T C G A C T G A T C G A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGCCCTCCTGCAGGGG--
---TNTCCTGCTGTGNNG
 G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A A T C G A T C G A C T G A T C G A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGCCCTCCTGCAGGGG
-GACCCCCCGCTGTGC
 G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A A T C G A T C G A C T G A T C G
A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGCCCTCCTGCAGGGG
-SNGCACCTGCHS---
 G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A A T C G A T C G A C T G A T C G
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCCCTCCTGCAGGGG
-GACCCCCCGCTGCGC
 G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A A T C G A T C G A C T G A T C G
A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCCCTCCTGCAGGGG
-GACCCCCCGCTGTG-
 G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A A T C G A T C G A C T G A T C G
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGCCCTCCTGCAGGGG
--NNCACCTGNN----
 G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A A T C G A T C G A C T G A T C G
A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CGCCCTCCTGCAGGGG---------
-----GCCASCAGGGGGCGCYVNNG
 G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A A T C G A T C G A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G