Information for 10-GCCCATTTGC (Motif 16)

A T C G A T G C G A T C G T A C C G T A A C G T A G C T A C G T A C T G A G T C
Reverse Opposite:
A C T G T G A C C G T A T C G A G T C A C G A T A C T G C T A G A T C G A T G C
p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.841
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif123.3
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets52.0 +/- 23.1bp
Average Position of motif in Background48.7 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCCCATTTGC----
-TTCATTTGCATAT
 A T C G A T G C G A T C G T A C C G T A A C G T A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCCCATTTGC---
-CTCATTTGCATW
 A T C G A T G C G A T C G T A C C G T A A C G T A G C T A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GCCCATTTGC----
----ATTTGCATAT
 A T C G A T G C G A T C G T A C C G T A A C G T A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCCCATTTGC-
-CCGATTGGCT
 A T C G A T G C G A T C G T A C C G T A A C G T A G C T A C G T A C T G A G T C A C G T
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GCCCATTTGC----
----ATTTGCATAA
 A T C G A T G C G A T C G T A C C G T A A C G T A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCCCATTTGC
--CCATATGT
 A T C G A T G C G A T C G T A C C G T A A C G T A G C T A C G T A C T G A G T C
A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCCATTTGC
GGCCATTAAC
 A T C G A T G C G A T C G T A C C G T A A C G T A G C T A C G T A C T G A G T C
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

Pou2f3/MA0627.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCCCATTTGC------
TNTAATTTGCATACNA
 A T C G A T G C G A T C G T A C C G T A A C G T A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCCCATTTGC------
TNTAATTTGCATACNA
 A T C G A T G C G A T C G T A C C G T A A C G T A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

Myc/MA0147.2/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCCCATTTGC--
--CCATGTGCTT
 A T C G A T G C G A T C G T A C C G T A A C G T A G C T A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T