Information for 21-CTGCGGGATTCCG (Motif 24)

A T G C G C A T C A T G T A G C C T A G T C A G C T A G C G T A C A G T A G C T G T A C G T A C C A T G
Reverse Opposite:
G A T C C A T G A C T G T C G A G T C A G C A T A G T C A G T C G A T C A T C G G A T C C G T A A T C G
p-value:1e-8
log p-value:-1.922e+01
Information Content per bp:1.681
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif132.2
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets41.5 +/- 24.4bp
Average Position of motif in Background50.5 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTGCGGGATTCCG
DCHCAGCAGGRGGCC-
 A C G T A C G T A C G T A T G C G C A T C A T G T A G C C T A G T C A G C T A G C G T A C A G T A G C T G T A C G T A C C A T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGCGGGATTCCG
DCTCAGCAGG------
 A C G T A C G T A C G T A T G C G C A T C A T G T A G C C T A G T C A G C T A G C G T A C A G T A G C T G T A C G T A C C A T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTGCGGGATTCCG
-GGCGGGAARN--
 A T G C G C A T C A T G T A G C C T A G T C A G C T A G C G T A C A G T A G C T G T A C G T A C C A T G
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTGCGGGATTCCG
TATGCGGGTA----
 A C G T A T G C G C A T C A T G T A G C C T A G T C A G C T A G C G T A C A G T A G C T G T A C G T A C C A T G
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTGCGGGATTCCG
NNNNATGCGGGTNNNN-
 A C G T A C G T A C G T A C G T A T G C G C A T C A T G T A G C C T A G T C A G C T A G C G T A C A G T A G C T G T A C G T A C C A T G
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTGCGGGATTCCG
CACAGCAGGGGG---
 A C G T A C G T A T G C G C A T C A T G T A G C C T A G T C A G C T A G C G T A C A G T A G C T G T A C G T A C C A T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTGCGGGATTCCG
GAGCACAGCAGGACA---
 A C G T A C G T A C G T A C G T A C G T A T G C G C A T C A T G T A G C C T A G T C A G C T A G C G T A C A G T A G C T G T A C G T A C C A T G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGCGGGATTCCG
GGGCGGGAAGG--
 A T G C G C A T C A T G T A G C C T A G T C A G C T A G C G T A C A G T A G C T G T A C G T A C C A T G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTGCGGGATTCCG
NCNCAGCGGGGGGTC-
 A C G T A C G T A C G T A T G C G C A T C A T G T A G C C T A G T C A G C T A G C G T A C A G T A G C T G T A C G T A C C A T G
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTGCGGGATTCCG
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T A T G C G C A T C A T G T A G C C T A G T C A G C T A G C G T A C A G T A G C T G T A C G T A C C A T G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T