Information for 19-CTACTGGCAGAAG (Motif 21)

A T G C A C G T C T G A G T A C A C G T A C T G A C T G A G T C C G T A A C T G C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G T C A C G T A C T G G T A C G T A C C G T A A C T G A G C T C G T A A T C G
p-value:1e-9
log p-value:-2.247e+01
Information Content per bp:1.935
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.7 +/- 23.8bp
Average Position of motif in Background37.4 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTACTGGCAGAAG
-TNNGGGCAG---
 A T G C A C G T C T G A G T A C A C G T A C T G A C T G A G T C C G T A A C T G C G T A C G T A A C T G
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTACTGGCAGAAG
CAATCACTGGCAGAAT
 A C G T A C G T A C G T A T G C A C G T C T G A G T A C A C G T A C T G A C T G A G T C C G T A A C T G C G T A C G T A A C T G
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTACTGGCAGAAG---
-CAATTGCAAAAATAT
 A T G C A C G T C T G A G T A C A C G T A C T G A C T G A G T C C G T A A C T G C G T A C G T A A C T G A C G T A C G T A C G T
A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CTACTGGCAGAAG-
--------NGAAGC
 A T G C A C G T C T G A G T A C A C G T A C T G A C T G A G T C C G T A A C T G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTACTGGCAGAAG
---TTGGCA----
 A T G C A C G T C T G A G T A C A C G T A C T G A C T G A G T C C G T A A C T G C G T A C G T A A C T G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTACTGGCAGAAG
--CTTGGCAA---
 A T G C A C G T C T G A G T A C A C G T A C T G A C T G A G T C C G T A A C T G C G T A C G T A A C T G
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTACTGGCAGAAG
CTAATKGV-----
 A T G C A C G T C T G A G T A C A C G T A C T G A C T G A G T C C G T A A C T G C G T A C G T A A C T G
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTACTGGCAGAAG
ACTTGCTACCTACACC--
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T C T G A G T A C A C G T A C T G A C T G A G T C C G T A A C T G C G T A C G T A A C T G
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CTACTGGCAGAAG
---ATGCCAGACN
 A T G C A C G T C T G A G T A C A C G T A C T G A C T G A G T C C G T A A C T G C G T A C G T A A C T G
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

ETV6/MA0645.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CTACTGGCAGAAG--
-----AGCGGAAGTG
 A T G C A C G T C T G A G T A C A C G T A C T G A C T G A G T C C G T A A C T G C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G