Information for 2-AGTGACCTCT (Motif 2)

C T G A A C T G A C G T T A C G G T C A G A T C G T A C G C A T G A T C G A C T
Reverse Opposite:
C T G A C T A G C G T A C A T G C T A G A C G T A T G C T G C A T G A C G A C T
p-value:1e-22
log p-value:-5.200e+01
Information Content per bp:1.689
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif8.85%
Number of Background Sequences with motif1081.9
Percentage of Background Sequences with motif2.26%
Average Position of motif in Targets56.2 +/- 23.0bp
Average Position of motif in Background50.2 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--AGTGACCTCT----
NNNGTGACCTTTGNNN
 A C G T A C G T C T G A A C T G A C G T T A C G G T C A G A T C G T A C G C A T G A T C G A C T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:AGTGACCTCT
--TGACCYCT
 C T G A A C T G A C G T T A C G G T C A G A T C G T A C G C A T G A T C G A C T
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--AGTGACCTCT----
NNNNTGACCTTTNNNN
 A C G T A C G T C T G A A C T G A C G T T A C G G T C A G A T C G T A C G C A T G A T C G A C T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:AGTGACCTCT
-GTGACCTT-
 C T G A A C T G A C G T T A C G G T C A G A T C G T A C G C A T G A T C G A C T
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--AGTGACCTCT-
CNNTTGACCTTTG
 A C G T A C G T C T G A A C T G A C G T T A C G G T C A G A T C G T A C G C A T G A T C G A C T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.75
Offset:2
Orientation:forward strand
Alignment:AGTGACCTCT----
--TGACCTTTNCNT
 C T G A A C T G A C G T T A C G G T C A G A T C G T A C G C A T G A T C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:AGTGACCTCT
--TGACCTYA
 C T G A A C T G A C G T T A C G G T C A G A T C G T A C G C A T G A T C G A C T
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---AGTGACCTCT----
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T C T G A A C T G A C G T T A C G G T C A G A T C G T A C G C A T G A T C G A C T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AGTGACCTCT-
-CTGACCTTTG
 C T G A A C T G A C G T T A C G G T C A G A T C G T A C G C A T G A T C G A C T A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:AGTGACCTCT
--TGACCT--
 C T G A A C T G A C G T T A C G G T C A G A T C G T A C G C A T G A T C G A C T
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T