Information for 8-AMYAMAGGCAARK (Motif 10)

G T C A T G A C A G T C C G T A G T A C C G T A A C T G A C T G A G T C C G T A C G T A T C G A A C T G
Reverse Opposite:
G T A C A G C T A C G T A C G T C T A G G T A C A G T C A C G T A C T G A C G T C T A G A C T G A C G T
p-value:1e-13
log p-value:-3.074e+01
Information Content per bp:1.833
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.2 +/- 28.5bp
Average Position of motif in Background35.5 +/- 2.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.76
Offset:4
Orientation:forward strand
Alignment:AMYAMAGGCAARK--
----AAGGCAAGTGT
 G T C A T G A C A G T C C G T A G T A C C G T A A C T G A C T G A G T C C G T A C G T A T C G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AMYAMAGGCAARK
---ATATGCAAAT
 G T C A T G A C A G T C C G T A G T A C C G T A A C T G A C T G A G T C C G T A C G T A T C G A A C T G
A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AMYAMAGGCAARK---
---ATATGCAAATNNN
 G T C A T G A C A G T C C G T A G T A C C G T A A C T G A C T G A G T C C G T A C G T A T C G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AMYAMAGGCAARK
--AAAAGTCAA--
 G T C A T G A C A G T C C G T A G T A C C G T A A C T G A C T G A G T C C G T A C G T A T C G A A C T G
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AMYAMAGGCAARK
AACAAAGG-----
 G T C A T G A C A G T C C G T A G T A C C G T A A C T G A C T G A G T C C G T A C G T A T C G A A C T G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AMYAMAGGCAARK
---TTATGCAAAT
 G T C A T G A C A G T C C G T A G T A C C G T A A C T G A C T G A G T C C G T A C G T A T C G A A C T G
A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AMYAMAGGCAARK
--NACAGGAAAT-
 G T C A T G A C A G T C C G T A G T A C C G T A A C T G A C T G A G T C C G T A C G T A T C G A A C T G
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AMYAMAGGCAARK
AAAACAAAGG-----
 A C G T A C G T G T C A T G A C A G T C C G T A G T A C C G T A A C T G A C T G A G T C C G T A C G T A T C G A A C T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AMYAMAGGCAARK
AAACCACAGC-----
 A C G T A C G T G T C A T G A C A G T C C G T A G T A C C G T A A C T G A C T G A G T C C G T A C G T A T C G A A C T G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AMYAMAGGCAARK
ATAAGAACAAAGGACTA-
 A C G T A C G T A C G T A C G T A C G T G T C A T G A C A G T C C G T A G T A C C G T A A C T G A C T G A G T C C G T A C G T A T C G A A C T G
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T