Information for 14-CAAGTCTGAT (Motif 19)

T A G C C G T A C T G A C T A G A C G T A G T C C G A T A C T G C G T A A C G T
Reverse Opposite:
T G C A C G A T A G T C C G T A A C T G C G T A A G T C A G C T A C G T A T C G
p-value:1e-8
log p-value:-2.061e+01
Information Content per bp:1.856
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif54.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets56.8 +/- 25.8bp
Average Position of motif in Background56.1 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAAGTCTGAT
-TWGTCTGV-
 T A G C C G T A C T G A C T A G A C G T A G T C C G A T A C T G C G T A A C G T
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

TBX1/MA0805.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAAGTCTGAT
-AGGTGTGA-
 T A G C C G T A C T G A C T A G A C G T A G T C C G A T A C T G C G T A A C G T
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

TBX15/MA0803.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAAGTCTGAT
-AGGTGTGA-
 T A G C C G T A C T G A C T A G A C G T A G T C C G A T A C T G C G T A A C G T
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

POL002.1_INR/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAAGTCTGAT
-NNNANTGA-
 T A G C C G T A C T G A C T A G A C G T A G T C C G A T A C T G C G T A A C G T
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAAGTCTGAT
VBSYGTCTGG-
 A C G T T A G C C G T A C T G A C T A G A C G T A G T C C G A T A C T G C G T A A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAAGTCTGAT
-AGGTGTGA-
 T A G C C G T A C T G A C T A G A C G T A G T C C G A T A C T G C G T A A C G T
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CAAGTCTGAT----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T T A G C C G T A C T G A C T A G A C G T A G T C C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAAGTCTGAT-
-AGGTGTGAAM
 T A G C C G T A C T G A C T A G A C G T A G T C C G A T A C T G C G T A A C G T A C G T
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

TBX4/MA0806.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAAGTCTGAT
-AGGTGTGA-
 T A G C C G T A C T G A C T A G A C G T A G T C C G A T A C T G C G T A A C G T
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAAGTCTGAT
-CTGTCTGG-
 T A G C C G T A C T G A C T A G A C G T A G T C C G A T A C T G C G T A A C G T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T