Information for 4-ACTRACMRTCACAGGT (Motif 8)

G C T A A T G C A C G T C T A G C G T A T G A C G T C A C T G A A G C T A G T C C G T A A G T C C G T A A C T G A C T G A C G T
Reverse Opposite:
C G T A G T A C A G T C G A C T T A C G A C G T A C T G C T G A A G C T A C G T A C T G A C G T A G T C C G T A A T C G C A G T
p-value:1e-13
log p-value:-3.103e+01
Information Content per bp:1.758
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.2 +/- 21.5bp
Average Position of motif in Background35.2 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACTRACMRTCACAGGT
SCTGTCAVTCAV----
 G C T A A T G C A C G T C T A G C G T A T G A C G T C A C T G A A G C T A G T C C G T A A G T C C G T A A C T G A C T G A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACTRACMRTCACAGGT
NCTGTCAATCAN----
 G C T A A T G C A C G T C T A G C G T A T G A C G T C A C T G A A G C T A G T C C G T A A G T C C G T A A C T G A C T G A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACTRACMRTCACAGGT
NNNTAACAATTATAN--
 A C G T G C T A A T G C A C G T C T A G C G T A T G A C G T C A C T G A A G C T A G T C C G T A A G T C C G T A A C T G A C T G A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ACTRACMRTCACAGGT-----
-----CAATCACTGGCAGAAT
 G C T A A T G C A C G T C T A G C G T A T G A C G T C A C T G A A G C T A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ACTRACMRTCACAGGT
GSCTGTCACTCA-----
 A C G T G C T A A T G C A C G T C T A G C G T A T G A C G T C A C T G A A G C T A G T C C G T A A G T C C G T A A C T G A C T G A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ACTRACMRTCACAGGT
---AAAGATCAAAGG-
 G C T A A T G C A C G T C T A G C G T A T G A C G T C A C T G A A G C T A G T C C G T A A G T C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:forward strand
Alignment:ACTRACMRTCACAGGT
------AGTCACGC--
 G C T A A T G C A C G T C T A G C G T A T G A C G T C A C T G A A G C T A G T C C G T A A G T C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:ACTRACMRTCACAGGT----
---AAAGGTCAAAGGTCAAC
 G C T A A T G C A C G T C T A G C G T A T G A C G T C A C T G A A G C T A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:ACTRACMRTCACAGGT--
----GAGGTCAAAGGTCA
 G C T A A T G C A C G T C T A G C G T A T G A C G T C A C T G A A G C T A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:forward strand
Alignment:ACTRACMRTCACAGGT
-----AAATCACAGCA
 G C T A A T G C A C G T C T A G C G T A T G A C G T C A C T G A A G C T A G T C C G T A A G T C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A