Information for 25-MCTTTTTAAAAAA (Motif 28)

G T A C G A T C G A C T G C A T C G A T A C G T C G A T G C T A C G T A C T G A C G T A C G T A C T G A
Reverse Opposite:
A G C T G C A T A C G T G A C T C G A T C G A T C G T A C G T A C G T A C G T A C T G A C T A G C A T G
p-value:1e-6
log p-value:-1.565e+01
Information Content per bp:1.731
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.1 +/- 29.0bp
Average Position of motif in Background54.9 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:MCTTTTTAAAAAA--
-AATATTAATAAAGA
 G T A C G A T C G A C T G C A T C G A T A C G T C G A T G C T A C G T A C T G A C G T A C G T A C T G A A C G T A C G T
A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:MCTTTTTAAAAAA
-NTAATTAATAT-
 G T A C G A T C G A C T G C A T C G A T A C G T C G A T G C T A C G T A C T G A C G T A C G T A C T G A
A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:MCTTTTTAAAAAA--
CCGTATTATAAACAA
 G T A C G A T C G A C T G C A T C G A T A C G T C G A T G C T A C G T A C T G A C G T A C G T A C T G A A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0080.1_Tbp_1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-MCTTTTTAAAAAA--
TCTTTATATATAAATA
 A C G T G T A C G A T C G A C T G C A T C G A T A C G T C G A T G C T A C G T A C T G A C G T A C G T A C T G A A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

PB0148.1_Mtf1_2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:MCTTTTTAAAAAA-
NNTTTTTCTTATNT
 G T A C G A T C G A C T G C A T C G A T A C G T C G A T G C T A C G T A C T G A C G T A C G T A C T G A A C G T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:MCTTTTTAAAAAA
----TTTAAT---
 G T A C G A T C G A C T G C A T C G A T A C G T C G A T G C T A C G T A C T G A C G T A C G T A C T G A
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:MCTTTTTAAAAAA
---NATTCAAAT-
 G T A C G A T C G A C T G C A T C G A T A C G T C G A T G C T A C G T A C T G A C G T A C G T A C T G A
A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:MCTTTTTAAAAAA----
NNNTTTTAATTAANNNN
 G T A C G A T C G A C T G C A T C G A T A C G T C G A T G C T A C G T A C T G A C G T A C G T A C T G A A C G T A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PH0150.1_Pou4f3/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--MCTTTTTAAAAAA-
GACNTCATTAATAANN
 A C G T A C G T G T A C G A T C G A C T G C A T C G A T A C G T C G A T G C T A C G T A C T G A C G T A C G T A C T G A A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

PH0091.1_Lhx1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---MCTTTTTAAAAAA-
CGAATTAATTAATAATG
 A C G T A C G T A C G T G T A C G A T C G A C T G C A T C G A T A C G T C G A T G C T A C G T A C T G A C G T A C G T A C T G A A C G T
T G A C T C A G C G T A C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C A T G C T A G C T A G A C T A C T G