Information for 19-GTCRTGCATW (Motif 25)

A C T G A C G T G T A C C T A G A C G T A C T G A T G C C G T A A G C T C G T A
Reverse Opposite:
C G A T C T G A A C G T A T C G A G T C C G T A A G T C A C T G C G T A A G T C
p-value:1e-8
log p-value:-1.896e+01
Information Content per bp:1.845
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets35.7 +/- 19.3bp
Average Position of motif in Background10.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTCRTGCATW
GTCATN----
 A C T G A C G T G T A C C T A G A C G T A C T G A T G C C G T A A G C T C G T A
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTCRTGCATW
AGTCACGC---
 A C G T A C T G A C G T G T A C C T A G A C G T A C T G A T G C C G T A A G C T C G T A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTCRTGCATW--
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T A C G T A C T G A C G T G T A C C T A G A C G T A C T G A T G C C G T A A G C T C G T A A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTCRTGCATW---
TAAGGTCGTAAAATCCT
 A C G T A C G T A C G T A C G T A C T G A C G T G T A C C T A G A C G T A C T G A T G C C G T A A G C T C G T A A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

PH0066.1_Hoxc11/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCRTGCATW--
TAAAGTCGTAAAATAG
 A C G T A C G T A C G T A C G T A C T G A C G T G T A C C T A G A C G T A C T G A T G C C G T A A G C T C G T A A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0067.1_Hoxc12/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCRTGCATW---
TTAGGTCGTAAAATTTC
 A C G T A C G T A C G T A C G T A C T G A C G T G T A C C T A G A C G T A C T G A T G C C G T A A G C T C G T A A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

PH0077.1_Hoxd12/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCRTGCATW---
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T A C G T A C T G A C G T G T A C C T A G A C G T A C T G A T G C C G T A A G C T C G T A A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTCRTGCATW-
NNTNTCATGAATGT
 A C G T A C G T A C G T A C T G A C G T G T A C C T A G A C G T A C T G A T G C C G T A A G C T C G T A A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

Atf3/MA0605.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTCRTGCATW
ACGTCATC----
 A C G T A C G T A C T G A C G T G T A C C T A G A C G T A C T G A T G C C G T A A G C T C G T A
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTCRTGCATW--
TAAAGTCGTAAAACAT
 A C G T A C G T A C G T A C G T A C T G A C G T G T A C C T A G A C G T A C T G A T G C C G T A A G C T C G T A A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T