Information for 11-AAAGKCAGMY (Motif 12)

G C T A T G C A C G T A C A T G A C T G A T G C G C T A T C A G T G A C G A C T
Reverse Opposite:
C T G A A C T G A G T C C G A T T A C G T G A C G T A C G C A T A C G T C G A T
p-value:1e-12
log p-value:-2.946e+01
Information Content per bp:1.472
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets47.7 +/- 30.5bp
Average Position of motif in Background60.4 +/- 37.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAAGKCAGMY
AAAAGTCAA--
 A C G T G C T A T G C A C G T A C A T G A C T G A T G C G C T A T C A G T G A C G A C T
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAAGKCAGMY-
-ATGCCAGACN
 G C T A T G C A C G T A C A T G A C T G A T G C G C T A T C A G T G A C G A C T A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAAGKCAGMY--
-AAGGCAAGTGT
 G C T A T G C A C G T A C A T G A C T G A T G C G C T A T C A G T G A C G A C T A C G T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAAGKCAGMY--
--TGGCAGTTGN
 G C T A T G C A C G T A C A T G A C T G A T G C G C T A T C A G T G A C G A C T A C G T A C G T
A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAAGKCAGMY
CAAAGGTCAG--
 A C G T A C G T G C T A T G C A C G T A C A T G A C T G A T G C G C T A T C A G T G A C G A C T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AAAGKCAGMY--
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T G C T A T G C A C G T A C A T G A C T G A T G C G C T A T C A G T G A C G A C T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AAAGKCAGMY
TCAAGGTCAN--
 A C G T A C G T G C T A T G C A C G T A C A T G A C T G A T G C G C T A T C A G T G A C G A C T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAAGKCAGMY
-TWGTCTGV-
 G C T A T G C A C G T A C A T G A C T G A T G C G C T A T C A G T G A C G A C T
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AAAGKCAGMY
ANGNAAAGGTCA---
 A C G T A C G T A C G T A C G T A C G T G C T A T G C A C G T A C A T G A C T G A T G C G C T A T C A G T G A C G A C T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AAAGKCAGMY
CAAGGHCANV-
 A C G T G C T A T G C A C G T A C A T G A C T G A T G C G C T A T C A G T G A C G A C T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T