Information for 7-GAGAATGATA (Motif 14)

C T A G C G T A A C T G C G T A C G T A A C G T C T A G C G T A G A C T C G T A
Reverse Opposite:
G C A T C T G A C G A T A G T C C G T A A C G T A C G T A G T C A C G T A G T C
p-value:1e-8
log p-value:-2.045e+01
Information Content per bp:1.846
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif104.9
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets48.8 +/- 25.8bp
Average Position of motif in Background48.2 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAGAATGATA
NNNANTGA--
 C T A G C G T A A C T G C G T A C G T A A C G T C T A G C G T A G A C T C G T A
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAGAATGATA
---CATGAC-
 C T A G C G T A A C T G C G T A C G T A A C G T C T A G C G T A G A C T C G T A
A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GAGAATGATA
GNNACCGAGAATNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C T G C G T A C G T A A C G T C T A G C G T A G A C T C G T A
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGAATGATA-------
AATNTTGATACCCTATN
 C T A G C G T A A C T G C G T A C G T A A C G T C T A G C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGAATGATA
GACAATGNN-
 C T A G C G T A A C T G C G T A C G T A A C G T C T A G C G T A G A C T C G T A
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

GATA5/MA0766.1/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GAGAATGATA---
-----AGATAAGA
 C T A G C G T A A C T G C G T A C G T A A C G T C T A G C G T A G A C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

PH0161.1_Six1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGAATGATA-------
ANNNATGATACCCCATC
 C T A G C G T A A C T G C G T A C G T A A C G T C T A G C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PB0059.1_Six6_1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGAATGATA-------
ANANNTGATACCCNATN
 C T A G C G T A A C T G C G T A C G T A A C G T C T A G C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

MF0010.1_Homeobox_class/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GAGAATGATA
---AATAATT
 C T A G C G T A A C T G C G T A C G T A A C G T C T A G C G T A G A C T C G T A
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GAGAATGATA
TTGACCGAGAATTCC-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C T G C G T A C G T A A C G T C T A G C G T A G A C T C G T A
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T