Information for 6-ATAACACTAC (Motif 13)

C G T A C A G T C T G A C G T A A G T C C G T A A G T C A C G T C T G A A G T C
Reverse Opposite:
T C A G A G C T C G T A A C T G C G A T A C T G A C G T G A C T G T C A A C G T
p-value:1e-8
log p-value:-2.069e+01
Information Content per bp:1.855
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif34.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.7 +/- 22.4bp
Average Position of motif in Background50.1 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--ATAACACTAC--
GCAAAACATTACTA
 A C G T A C G T C G T A C A G T C T G A C G T A A G T C C G T A A G T C A C G T C T G A A G T C A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ATAACACTAC
ATGTCACAACAACAC
 A C G T A C G T A C G T A C G T A C G T C G T A C A G T C T G A C G T A A G T C C G T A A G T C A C G T C T G A A G T C
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATAACACTAC
-NAACAAT--
 C G T A C A G T C T G A C G T A A G T C C G T A A G T C A C G T C T G A A G T C
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ATAACACTAC
CAAACAACAACACCT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C A G T C T G A C G T A A G T C C G T A A G T C A C G T C T G A A G T C
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATAACACTAC
NTTNAGAACAATTA
 A C G T A C G T A C G T A C G T C G T A C A G T C T G A C G T A A G T C C G T A A G T C A C G T C T G A A G T C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATAACACTAC--
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C G T C G T A C A G T C T G A C G T A A G T C C G T A A G T C A C G T C T G A A G T C A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0074.1_Sox8_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ATAACACTAC----
TNNAGAACAATANATNN
 A C G T A C G T A C G T C G T A C A G T C T G A C G T A A G T C C G T A A G T C A C G T C T G A A G T C A C G T A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0073.1_Sox7_1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----ATAACACTAC-------
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T A C G T C G T A C A G T C T G A C G T A A G T C C G T A A G T C A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0072.1_Sox5_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATAACACTAC---
TTTAGAACAATAAAAT
 A C G T A C G T A C G T C G T A C A G T C T G A C G T A A G T C C G T A A G T C A C G T C T G A A G T C A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATAACACTAC---
TTAAGAACAATAAATT
 A C G T A C G T A C G T C G T A C A G T C T G A C G T A A G T C C G T A A G T C A C G T C T G A A G T C A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T