Information for 6-CTCCGGGAGG (Motif 3)

G T A C A C G T A T G C T G A C A C T G C T A G A C T G T C G A A T C G T A C G
Reverse Opposite:
A T G C T A G C A G C T T G A C G A T C T G A C A C T G A T C G T G C A A C T G
p-value:1e-15
log p-value:-3.561e+01
Information Content per bp:1.676
Number of Target Sequences with motif110.0
Percentage of Target Sequences with motif13.40%
Number of Background Sequences with motif2741.3
Percentage of Background Sequences with motif5.75%
Average Position of motif in Targets49.4 +/- 27.0bp
Average Position of motif in Background50.0 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTCCGGGAGG--
CCCCCCCGGGGGGGT
 A C G T A C G T A C G T G T A C A C G T A T G C T G A C A C T G C T A G A C T G T C G A A T C G T A C G A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTCCGGGAGG--
CCCCCCCGGGGGGGT
 A C G T A C G T A C G T G T A C A C G T A T G C T G A C A C T G C T A G A C T G T C G A A T C G T A C G A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTCCGGGAGG-
CACCCCCGGGGGGG
 A C G T A C G T A C G T G T A C A C G T A T G C T G A C A C T G C T A G A C T G T C G A A T C G T A C G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTCCGGGAGG
GCTCCG-----
 A C G T G T A C A C G T A T G C T G A C A C T G C T A G A C T G T C G A A T C G T A C G
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGGGAGG-----
ANTNCCGGGGGGAANTT
 A C G T A C G T G T A C A C G T A T G C T G A C A C T G C T A G A C T G T C G A A T C G T A C G A C G T A C G T A C G T A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTCCGGGAGG--
NCNCAGCGGGGGGTC
 A C G T A C G T A C G T G T A C A C G T A T G C T G A C A C T G C T A G A C T G T C G A A T C G T A C G A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTCCGGGAGG----
----GGGAGGACNG
 G T A C A C G T A T G C T G A C A C T G C T A G A C T G T C G A A T C G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Gabpa/MA0062.2/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTCCGGGAGG---
--CCGGAAGTGGC
 G T A C A C G T A T G C T G A C A C T G C T A G A C T G T C G A A T C G T A C G A C G T A C G T A C G T
A C G T A C G T T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTCCGGGAGG--
NCGCAGCGGGGGGTC
 A C G T A C G T A C G T G T A C A C G T A T G C T G A C A C T G C T A G A C T G T C G A A T C G T A C G A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCCGGGAGG-
-RCCGGAAGTD
 G T A C A C G T A T G C T G A C A C T G C T A G A C T G T C G A A T C G T A C G A C G T
A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G