Information for 9-CTCATAATGA (Motif 9)

T A G C A C G T G A T C C G T A C G A T C G T A C G T A A C G T A C T G G T C A
Reverse Opposite:
A C G T A G T C C G T A A C G T C G A T G C T A A C G T C T A G C G T A A T C G
p-value:1e-14
log p-value:-3.296e+01
Information Content per bp:1.857
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif74.5
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets59.9 +/- 23.8bp
Average Position of motif in Background55.9 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CTCATAATGA------
AAACATAATGAGGTTGC
 A C G T T A G C A C G T G A T C C G T A C G A T C G T A C G T A A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CTCATAATGA---
BAGTCATANTGAAAG
 A C G T A C G T T A G C A C G T G A T C C G T A C G A T C G T A C G T A A C G T A C T G G T C A A C G T A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CTCATAATGA---
---NTAATGAGCT
 T A G C A C G T G A T C C G T A C G A T C G T A C G T A A C G T A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CTCATAATGA-----
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T T A G C A C G T G A T C C G T A C G A T C G T A C G T A A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PH0151.1_Pou6f1_1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTCATAATGA------
GACGATAATGAGCTTGC
 A C G T T A G C A C G T G A T C C G T A C G A T C G T A C G T A A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTCATAATGA
--GKTAATGR
 T A G C A C G T G A T C C G T A C G A T C G T A C G T A A C G T A C T G G T C A
A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

EMX1/MA0612.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTCATAATGA--
--CCTAATTACC
 T A G C A C G T G A T C C G T A C G A T C G T A C G T A A C G T A C T G G T C A A C G T A C G T
A C G T A C G T T G A C A G T C G A C T T C G A C G T A C G A T C A G T C T G A T A G C A G T C

EVX1/MA0887.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTCATAATGA--
--GNTAATTANN
 T A G C A C G T G A T C C G T A C G A T C G T A C G T A A C G T A C T G G T C A A C G T A C G T
A C G T A C G T A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C

NKX6-2/MA0675.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTCATAATGA-
---TTAATTAN
 T A G C A C G T G A T C C G T A C G A T C G T A C G T A A C G T A C T G G T C A A C G T
A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

EVX2/MA0888.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTCATAATGA--
--NNTAATTANN
 T A G C A C G T G A T C C G T A C G A T C G T A C G T A A C G T A C T G G T C A A C G T A C G T
A C G T A C G T T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C