Information for 23-ACTGTGCGTGCAT (Motif 20)

C G T A A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A C T G A C G T
p-value:1e-8
log p-value:-1.934e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 22.9bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ACTGTGCGTGCAT
---TTGCGTGCVA
 C G T A A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:ACTGTGCGTGCAT
----TGCGTG---
 C G T A A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACTGTGCGTGCAT
-CTGTTCCTGG--
 C G T A A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C C G T A A C G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACTGTGCGTGCAT
---GGACGTGC--
 C G T A A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ACTGTGCGTGCAT
---RTACGTGC--
 C G T A A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ACTGTGCGTGCAT
----TACGTGCV-
 C G T A A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACTGTGCGTGCAT
GCTGTG-------
 C G T A A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C C G T A A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ACTGTGCGTGCAT
-GGGTACGTGC--
 C G T A A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C C G T A A C G T
A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ACTGTGCGTGCAT-----
-NTNTATGTGCACATNNN
 C G T A A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ACTGTGCGTGCAT--
NNGCGTGTGTGCNGCN
 A C G T C G T A A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T