Information for 15-CAGGWCCACA (Motif 20)

G T A C G T C A A T C G A C T G C G A T A T G C A T G C G T C A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A T C G A T C G C G T A G T A C A T G C A C G T A C T G
p-value:1e-7
log p-value:-1.819e+01
Information Content per bp:1.836
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif162.4
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets49.2 +/- 23.4bp
Average Position of motif in Background50.3 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CAGGWCCACA---
-NWAACCACADNN
 G T A C G T C A A T C G A C T G C G A T A T G C A T G C G T C A A G T C C G T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CAGGWCCACA
---ATCCAC-
 G T A C G T C A A T C G A C T G C G A T A T G C A T G C G T C A A G T C C G T A
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CAGGWCCACA---
--AAACCACAGAN
 G T A C G T C A A T C G A C T G C G A T A T G C A T G C G T C A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CAGGWCCACA--
--AAACCACAGC
 G T A C G T C A A T C G A C T G C G A T A T G C A T G C G T C A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGGWCCACA-----
CATAAGACCACCATTAC
 A C G T A C G T G T A C G T C A A T C G A C T G C G A T A T G C A T G C G T C A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGGWCCACA-
-NAAACCACAG
 G T A C G T C A A T C G A C T G C G A T A T G C A T G C G T C A A G T C C G T A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAGGWCCACA--
--AAACCACANN
 G T A C G T C A A T C G A C T G C G A T A T G C A T G C G T C A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

GLI2/MA0734.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGGWCCACA---
-GCGACCACACTG
 G T A C G T C A A T C G A C T G C G A T A T G C A T G C G T C A A G T C C G T A A C G T A C G T A C G T
A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

PB0104.1_Zscan4_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGGWCCACA-----
TACATGTGCACATAAAA
 A C G T A C G T G T A C G T C A A T C G A C T G C G A T A T G C A T G C G T C A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAGGWCCACA----
--GGACCACCCACG
 G T A C G T C A A T C G A C T G C G A T A T G C A T G C G T C A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G