Information for 13-CCYSACTGRGAKC (Motif 19)

G T A C A G T C A G T C A T G C C G T A A G T C A C G T A C T G C T G A A T C G C G T A A C G T A G T C
Reverse Opposite:
A C T G G T C A A C G T A T G C A G C T A G T C C G T A A C T G A C G T A T C G C T A G C T A G A C T G
p-value:1e-8
log p-value:-1.945e+01
Information Content per bp:1.870
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.8 +/- 28.2bp
Average Position of motif in Background62.8 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCYSACTGRGAKC
-CCTGCTGAGH--
 G T A C A G T C A G T C A T G C C G T A A G T C A C G T A C T G C T G A A T C G C G T A A C G T A G T C
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCYSACTGRGAKC--
CAATCACTGGCAGAAT
 A C G T G T A C A G T C A G T C A T G C C G T A A G T C A C G T A C T G C T G A A T C G C G T A A C G T A G T C A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCYSACTGRGAKC---
-NNNACCGAGAGTNNN
 G T A C A G T C A G T C A T G C C G T A A G T C A C G T A C T G C T G A A T C G C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCYSACTGRGAKC
GGGGCTYGKCTGGGA--
 A C G T A C G T A C G T A C G T G T A C A G T C A G T C A T G C C G T A A G T C A C G T A C T G C T G A A T C G C G T A A C G T A G T C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCYSACTGRGAKC
GGCCYCCTGCTGDGH--
 A C G T A C G T A C G T A C G T G T A C A G T C A G T C A T G C C G T A A G T C A C G T A C T G C T G A A T C G C G T A A C G T A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCYSACTGRGAKC
CCCCCTGCTGTG---
 A C G T A C G T G T A C A G T C A G T C A T G C C G T A A G T C A C G T A C T G C T G A A T C G C G T A A C G T A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCYSACTGRGAKC
-BTGABTGACAGS
 G T A C A G T C A G T C A T G C C G T A A G T C A C G T A C T G C T G A A T C G C G T A A C G T A G T C
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCYSACTGRGAKC
TCNCCTGCTGNGNNN
 A C G T A C G T G T A C A G T C A G T C A T G C C G T A A G T C A C G T A C T G C T G A A T C G C G T A A C G T A G T C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCYSACTGRGAKC
--WDNCTGGGCA-
 G T A C A G T C A G T C A T G C C G T A A G T C A C G T A C T G C T G A A T C G C G T A A C G T A G T C
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCYSACTGRGAKC
GACCCCCCGCTGCGC--
 A C G T A C G T A C G T A C G T G T A C A G T C A G T C A T G C C G T A A G T C A C G T A C T G C T G A A T C G C G T A A C G T A G T C
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T