Information for 8-CTTTTTAAAACAGCGG (Motif 10)

A G T C A G C T C G A T A C G T A C G T A C G T C G T A C G T A C G T A C T G A G T A C C G T A C T A G A G T C A C T G T A C G
Reverse Opposite:
A G T C A G T C A C T G A G T C A C G T A C T G A G C T A C G T A C G T C G A T C G T A C G T A G T C A C G T A C T G A A C T G
p-value:1e-13
log p-value:-3.073e+01
Information Content per bp:1.835
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.4 +/- 32.3bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTTTTTAAAACAGCGG
---TTTGAAACCG---
 A G T C A G C T C G A T A C G T A C G T A C G T C G T A C G T A C G T A C T G A G T A C C G T A C T A G A G T C A C T G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTTTTTAAAACAGCGG---
--TCNNTTTACAGCGNNNT
 A G T C A G C T C G A T A C G T A C G T A C G T C G T A C G T A C G T A C T G A G T A C C G T A C T A G A G T C A C T G T A C G A C G T A C G T A C G T
A C G T A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTTTTTAAAACAGCGG---
--TCNNTTTACAGCGNNNT
 A G T C A G C T C G A T A C G T A C G T A C G T C G T A C G T A C G T A C T G A G T A C C G T A C T A G A G T C A C T G T A C G A C G T A C G T A C G T
A C G T A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTTTTTAAAACAGCGG
--ATTTGAATT-----
 A G T C A G C T C G A T A C G T A C G T A C G T C G T A C G T A C G T A C T G A G T A C C G T A C T A G A G T C A C T G T A C G
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTTTTTAAAACAGCGG---
--TCNCTTTACAGCGNNNT
 A G T C A G C T C G A T A C G T A C G T A C G T C G T A C G T A C G T A C T G A G T A C C G T A C T A G A G T C A C T G T A C G A C G T A C G T A C G T
A C G T A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTTTTTAAAACAGCGG
CCTTTTATAGNC----
 A G T C A G C T C G A T A C G T A C G T A C G T C G T A C G T A C G T A C T G A G T A C C G T A C T A G A G T C A C T G T A C G
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTTTTTAAAACAGCGG-
-ATATCAAAACAAAACA
 A G T C A G C T C G A T A C G T A C G T A C G T C G T A C G T A C G T A C T G A G T A C C G T A C T A G A G T C A C T G T A C G A C G T
A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

LBX1/MA0618.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTTTTTAAAACAGCGG
CTAATTAA--------
 A G T C A G C T C G A T A C G T A C G T A C G T C G T A C G T A C G T A C T G A G T A C C G T A C T A G A G T C A C T G T A C G
T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTTAAAACAGCGG
NNNTTTNTAATACNG---
 A C G T A C G T A G T C A G C T C G A T A C G T A C G T A C G T C G T A C G T A C G T A C T G A G T A C C G T A C T A G A G T C A C T G T A C G
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTTTTTAAAACAGCGG
--WWTRTAAACAVG--
 A G T C A G C T C G A T A C G T A C G T A C G T C G T A C G T A C G T A C T G A G T A C C G T A C T A G A G T C A C T G T A C G
A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G A C G T A C G T