Information for 15-ACCCTAAAAT (Motif 20)

C G T A A T G C G T A C T G A C G C A T T G C A G C T A T C G A G T C A C A G T
Reverse Opposite:
G T C A C A G T A G C T C G A T A C G T C G T A A C T G C A T G T A C G G C A T
p-value:1e-1
log p-value:-2.727e+00
Information Content per bp:1.613
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif25.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets35.0 +/- 9.0bp
Average Position of motif in Background54.6 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ACCCTAAAAT----
AATGCAATAAAATTTAT
 A C G T A C G T A C G T C G T A A T G C G T A C T G A C G C A T T G C A G C T A T C G A G T C A C A G T A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ACCCTAAAAT--
--CCAAAAATAG
 C G T A A T G C G T A C T G A C G C A T T G C A G C T A T C G A G T C A C A G T A C G T A C G T
A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

PH0064.1_Hoxb9/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACCCTAAAAT---
AGAGCCATAAAATTCG
 A C G T A C G T A C G T C G T A A T G C G T A C T G A C G C A T T G C A G C T A T C G A G T C A C A G T A C G T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

CDX2/MA0465.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACCCTAAAAT
AAGCCATAAAA-
 A C G T A C G T C G T A A T G C G T A C T G A C G C A T T G C A G C T A T C G A G T C A C A G T
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACCCTAAAAT-
NGYCATAAAWCH
 A C G T C G T A A T G C G T A C T G A C G C A T T G C A G C T A T C G A G T C A C A G T A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACCCTAAAAT---
-KCCAAAAATAGC
 C G T A A T G C G T A C T G A C G C A T T G C A G C T A T C G A G T C A C A G T A C G T A C G T A C G T
A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACCCTAAAAT
GTCATAAAAN
 C G T A A T G C G T A C T G A C G C A T T G C A G C T A T C G A G T C A C A G T
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

PH0056.1_Hoxa9/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACCCTAAAAT----
ACGGCCATAAAATTAAT
 A C G T A C G T A C G T C G T A A T G C G T A C T G A C G C A T T G C A G C T A T C G A G T C A C A G T A C G T A C G T A C G T A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

CDX1/MA0878.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACCCTAAAAT
GCAATAAAA-
 C G T A A T G C G T A C T G A C G C A T T G C A G C T A T C G A G T C A C A G T
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACCCTAAAAT---
CTACCAATAAAATTCT
 A C G T A C G T A C G T C G T A A T G C G T A C T G A C G C A T T G C A G C T A T C G A G T C A C A G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T