Information for 8-GTSATTTAAAGAGNCA (Motif 11)

A T C G A C G T A T G C C G T A A G C T C A G T C A G T C G T A G C T A C T G A A C T G C G T A A C T G A C G T T G A C C G T A
Reverse Opposite:
A C G T A C T G G T C A A G T C C G A T T A G C A G C T C G A T C G A T G T C A G C T A C T G A A C G T A T C G G T C A A T G C
p-value:1e-13
log p-value:-3.064e+01
Information Content per bp:1.728
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.4 +/- 20.6bp
Average Position of motif in Background63.3 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTSATTTAAAGAGNCA
--NATTCAAAT-----
 A T C G A C G T A T G C C G T A A G C T C A G T C A G T C G T A G C T A C T G A A C T G C G T A A C T G A C G T T G A C C G T A
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTSATTTAAAGAGNCA
CNGTGATTTN--------
 A C G T A C G T A T C G A C G T A T G C C G T A A G C T C A G T C A G T C G T A G C T A C T G A A C T G C G T A A C T G A C G T T G A C C G T A
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTSATTTAAAGAGNCA-
--BAGTCATANTGAAAG
 A T C G A C G T A T G C C G T A A G C T C A G T C A G T C G T A G C T A C T G A A C T G C G T A A C T G A C G T T G A C C G T A A C G T
A C G T A C G T A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTSATTTAAAGAGNCA---
-WNAGTCADAVTGAAACTN
 A T C G A C G T A T G C C G T A A G C T C A G T C A G T C G T A G C T A C T G A A C T G C G T A A C T G A C G T T G A C C G T A A C G T A C G T A C G T
A C G T G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

Arid3b/MA0601.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTSATTTAAAGAGNCA
NTAATTAATAT-----
 A T C G A C G T A T G C C G T A A G C T C A G T C A G T C G T A G C T A C T G A A C T G C G T A A C T G A C G T T G A C C G T A
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTSATTTAAAGAGNCA
GTAATTAA--------
 A T C G A C G T A T G C C G T A A G C T C A G T C A G T C G T A G C T A C T G A A C T G C G T A A C T G A C G T T G A C C G T A
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GTSATTTAAAGAGNCA
GGAGGTCATTAATTAT----
 A C G T A C G T A C G T A C G T A T C G A C G T A T G C C G T A A G C T C A G T C A G T C G T A G C T A C T G A A C T G C G T A A C T G A C G T T G A C C G T A
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T A C G T A C G T A C G T A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GTSATTTAAAGAGNCA
ACCGGCAATTAATAAA----
 A C G T A C G T A C G T A C G T A T C G A C G T A T G C C G T A A G C T C A G T C A G T C G T A G C T A C T G A A C T G C G T A A C T G A C G T T G A C C G T A
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A A C G T A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTSATTTAAAGAGNCA
NNANTGATTGATNNNN---
 A C G T A C G T A C G T A T C G A C G T A T G C C G T A A G C T C A G T C A G T C G T A G C T A C T G A A C T G C G T A A C T G A C G T T G A C C G T A
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTSATTTAAAGAGNCA
---ATTAAA-------
 A T C G A C G T A T G C C G T A A G C T C A G T C A G T C G T A G C T A C T G A A C T G C G T A A C T G A C G T T G A C C G T A
A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T