Information for 7-GDTTGCAGAVAACTCT (Motif 10)

A T C G C A T G G A C T A G C T A C T G A G T C C G T A A C T G C G T A T A C G C G T A G T C A A T G C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A T C G A C G T A C G T A G T C C G A T A G T C C G A T C T A G A G T C C T G A C T G A G A T C A T G C
p-value:1e-13
log p-value:-3.121e+01
Information Content per bp:1.794
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.3 +/- 22.8bp
Average Position of motif in Background64.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GDTTGCAGAVAACTCT
CAATTGCAAAAATAT--
 A C G T A T C G C A T G G A C T A G C T A C T G A G T C C G T A A C T G C G T A T A C G C G T A G T C A A T G C A C G T A G T C A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:2
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GDTTGCAGAVAACTCT-
--TTCTAGAABNTTCTA
 A T C G C A T G G A C T A G C T A C T G A G T C C G T A A C T G C G T A T A C G C G T A G T C A A T G C A C G T A G T C A C G T A C G T
A C G T A C G T G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GDTTGCAGAVAACTCT---
--NNNCTGATATCTCNNNN
 A T C G C A T G G A C T A G C T A C T G A G T C C G T A A C T G C G T A T A C G C G T A G T C A A T G C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GDTTGCAGAVAACTCT
NNNANTGCAGTGCNNTT-
 A C G T A C G T A T C G C A T G G A C T A G C T A C T G A G T C C G T A A C T G C G T A T A C G C G T A G T C A A T G C A C G T A G T C A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GDTTGCAGAVAACTCT--
--NNGGCGACACCTCNNN
 A T C G C A T G G A C T A G C T A C T G A G T C C G T A A C T G C G T A T A C G C G T A G T C A A T G C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GDTTGCAGAVAACTCT
----BCAGACWA----
 A T C G C A T G G A C T A G C T A C T G A G T C C G T A A C T G C G T A T A C G C G T A G T C A A T G C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GDTTGCAGAVAACTCT-----
-----CNGACACCTGTTCNNN
 A T C G C A T G G A C T A G C T A C T G A G T C C G T A A C T G C G T A T A C G C G T A G T C A A T G C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:GDTTGCAGAVAACTCT
----CCAGACRSVB--
 A T C G C A T G G A C T A G C T A C T G A G T C C G T A A C T G C G T A T A C G C G T A G T C A A T G C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:GDTTGCAGAVAACTCT
-AGGGAAGTCATTTCT
 A T C G C A T G G A C T A G C T A C T G A G T C C G T A A C T G C G T A T A C G C G T A G T C A A T G C A C G T A G T C A C G T
A C G T C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.47
Offset:0
Orientation:forward strand
Alignment:GDTTGCAGAVAACTCT----
NNTTCTGGAANNTTCTAGAA
 A T C G C A T G G A C T A G C T A C T G A G T C C G T A A C T G C G T A T A C G C G T A G T C A A T G C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A