Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-171 | -3.943e+02 | 0.0000 | 154.0 | 17.62% | 272.3 | 0.58% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-134 | -3.099e+02 | 0.0000 | 160.0 | 18.31% | 542.8 | 1.15% | motif file (matrix) |
svg |
3 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-72 | -1.677e+02 | 0.0000 | 122.0 | 13.96% | 745.8 | 1.58% | motif file (matrix) |
svg |
4 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-59 | -1.365e+02 | 0.0000 | 139.0 | 15.90% | 1337.4 | 2.84% | motif file (matrix) |
svg |
5 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-52 | -1.206e+02 | 0.0000 | 143.0 | 16.36% | 1627.1 | 3.45% | motif file (matrix) |
svg |
6 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-47 | -1.104e+02 | 0.0000 | 148.0 | 16.93% | 1903.1 | 4.04% | motif file (matrix) |
svg |
7 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-44 | -1.031e+02 | 0.0000 | 52.0 | 5.95% | 163.6 | 0.35% | motif file (matrix) |
svg |
8 |
| E-box(bHLH)/Promoter/Homer | 1e-40 | -9.375e+01 | 0.0000 | 56.0 | 6.41% | 244.7 | 0.52% | motif file (matrix) |
svg |
9 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-39 | -9.184e+01 | 0.0000 | 132.0 | 15.10% | 1800.8 | 3.82% | motif file (matrix) |
svg |
10 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-37 | -8.734e+01 | 0.0000 | 126.0 | 14.42% | 1721.2 | 3.65% | motif file (matrix) |
svg |
11 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-37 | -8.707e+01 | 0.0000 | 95.0 | 10.87% | 976.4 | 2.07% | motif file (matrix) |
svg |
12 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-37 | -8.671e+01 | 0.0000 | 137.0 | 15.68% | 2030.8 | 4.31% | motif file (matrix) |
svg |
13 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-31 | -7.234e+01 | 0.0000 | 203.0 | 23.23% | 4535.6 | 9.63% | motif file (matrix) |
svg |
14 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-26 | -6.159e+01 | 0.0000 | 180.0 | 20.59% | 4083.7 | 8.67% | motif file (matrix) |
svg |
15 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-24 | -5.697e+01 | 0.0000 | 138.0 | 15.79% | 2780.9 | 5.90% | motif file (matrix) |
svg |
16 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-19 | -4.581e+01 | 0.0000 | 68.0 | 7.78% | 947.2 | 2.01% | motif file (matrix) |
svg |
17 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-18 | -4.309e+01 | 0.0000 | 62.0 | 7.09% | 841.0 | 1.79% | motif file (matrix) |
svg |
18 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-18 | -4.168e+01 | 0.0000 | 52.0 | 5.95% | 618.3 | 1.31% | motif file (matrix) |
svg |
19 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-17 | -4.116e+01 | 0.0000 | 70.0 | 8.01% | 1093.6 | 2.32% | motif file (matrix) |
svg |
20 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-17 | -4.065e+01 | 0.0000 | 64.0 | 7.32% | 939.5 | 1.99% | motif file (matrix) |
svg |
21 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-16 | -3.837e+01 | 0.0000 | 69.0 | 7.89% | 1126.9 | 2.39% | motif file (matrix) |
svg |
22 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-16 | -3.699e+01 | 0.0000 | 73.0 | 8.35% | 1276.0 | 2.71% | motif file (matrix) |
svg |
23 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-15 | -3.635e+01 | 0.0000 | 41.0 | 4.69% | 442.0 | 0.94% | motif file (matrix) |
svg |
24 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-13 | -3.031e+01 | 0.0000 | 112.0 | 12.81% | 2825.2 | 6.00% | motif file (matrix) |
svg |
25 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-11 | -2.739e+01 | 0.0000 | 74.0 | 8.47% | 1587.5 | 3.37% | motif file (matrix) |
svg |
26 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-11 | -2.663e+01 | 0.0000 | 31.0 | 3.55% | 351.4 | 0.75% | motif file (matrix) |
svg |
27 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-11 | -2.575e+01 | 0.0000 | 67.0 | 7.67% | 1408.0 | 2.99% | motif file (matrix) |
svg |
28 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-9 | -2.297e+01 | 0.0000 | 113.0 | 12.93% | 3226.2 | 6.85% | motif file (matrix) |
svg |
29 |
| GFY(?)/Promoter/Homer | 1e-8 | -2.036e+01 | 0.0000 | 20.0 | 2.29% | 193.8 | 0.41% | motif file (matrix) |
svg |
30 |
| CRE(bZIP)/Promoter/Homer | 1e-8 | -2.030e+01 | 0.0000 | 38.0 | 4.35% | 653.7 | 1.39% | motif file (matrix) |
svg |
31 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-8 | -2.025e+01 | 0.0000 | 17.0 | 1.95% | 136.5 | 0.29% | motif file (matrix) |
svg |
32 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-8 | -2.002e+01 | 0.0000 | 67.0 | 7.67% | 1620.6 | 3.44% | motif file (matrix) |
svg |
33 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-8 | -1.905e+01 | 0.0000 | 86.0 | 9.84% | 2377.7 | 5.05% | motif file (matrix) |
svg |
34 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-7 | -1.820e+01 | 0.0000 | 18.0 | 2.06% | 177.2 | 0.38% | motif file (matrix) |
svg |
35 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-7 | -1.784e+01 | 0.0000 | 114.0 | 13.04% | 3582.1 | 7.61% | motif file (matrix) |
svg |
36 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-7 | -1.758e+01 | 0.0000 | 201.0 | 23.00% | 7462.3 | 15.84% | motif file (matrix) |
svg |
37 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-7 | -1.724e+01 | 0.0000 | 13.0 | 1.49% | 93.0 | 0.20% | motif file (matrix) |
svg |
38 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-7 | -1.706e+01 | 0.0000 | 78.0 | 8.92% | 2172.7 | 4.61% | motif file (matrix) |
svg |
39 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-7 | -1.654e+01 | 0.0000 | 12.0 | 1.37% | 81.7 | 0.17% | motif file (matrix) |
svg |
40 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-6 | -1.596e+01 | 0.0000 | 71.0 | 8.12% | 1959.2 | 4.16% | motif file (matrix) |
svg |
41 |
| NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.549e+01 | 0.0000 | 37.0 | 4.23% | 756.6 | 1.61% | motif file (matrix) |
svg |
42 |
| ETS(ETS)/Promoter/Homer | 1e-6 | -1.471e+01 | 0.0000 | 39.0 | 4.46% | 848.6 | 1.80% | motif file (matrix) |
svg |
43 |
| NRF(NRF)/Promoter/Homer | 1e-6 | -1.389e+01 | 0.0000 | 38.0 | 4.35% | 843.0 | 1.79% | motif file (matrix) |
svg |
44 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-5 | -1.372e+01 | 0.0000 | 21.0 | 2.40% | 320.9 | 0.68% | motif file (matrix) |
svg |
45 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-5 | -1.359e+01 | 0.0000 | 85.0 | 9.73% | 2664.5 | 5.66% | motif file (matrix) |
svg |
46 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.316e+01 | 0.0000 | 54.0 | 6.18% | 1453.2 | 3.09% | motif file (matrix) |
svg |
47 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-5 | -1.248e+01 | 0.0000 | 54.0 | 6.18% | 1488.9 | 3.16% | motif file (matrix) |
svg |
48 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.248e+01 | 0.0000 | 47.0 | 5.38% | 1223.4 | 2.60% | motif file (matrix) |
svg |
49 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-5 | -1.219e+01 | 0.0000 | 21.0 | 2.40% | 354.6 | 0.75% | motif file (matrix) |
svg |
50 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-5 | -1.203e+01 | 0.0000 | 190.0 | 21.74% | 7548.7 | 16.03% | motif file (matrix) |
svg |
51 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-5 | -1.200e+01 | 0.0000 | 16.0 | 1.83% | 221.1 | 0.47% | motif file (matrix) |
svg |
52 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-5 | -1.180e+01 | 0.0001 | 25.0 | 2.86% | 485.9 | 1.03% | motif file (matrix) |
svg |
53 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-4 | -1.127e+01 | 0.0001 | 22.0 | 2.52% | 407.2 | 0.86% | motif file (matrix) |
svg |
54 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-4 | -1.104e+01 | 0.0001 | 49.0 | 5.61% | 1372.4 | 2.91% | motif file (matrix) |
svg |
55 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-4 | -1.053e+01 | 0.0002 | 146.0 | 16.70% | 5651.3 | 12.00% | motif file (matrix) |
svg |
56 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-4 | -1.005e+01 | 0.0003 | 101.0 | 11.56% | 3642.8 | 7.73% | motif file (matrix) |
svg |
57 |
| NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer | 1e-3 | -8.522e+00 | 0.0013 | 34.0 | 3.89% | 929.4 | 1.97% | motif file (matrix) |
svg |
58 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.318e+00 | 0.0015 | 43.0 | 4.92% | 1294.0 | 2.75% | motif file (matrix) |
svg |
59 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.152e+00 | 0.0018 | 61.0 | 6.98% | 2056.9 | 4.37% | motif file (matrix) |
svg |
60 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.980e+00 | 0.0021 | 276.0 | 31.58% | 12420.6 | 26.37% | motif file (matrix) |
svg |
61 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.867e+00 | 0.0023 | 43.0 | 4.92% | 1323.2 | 2.81% | motif file (matrix) |
svg |
62 |
| PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.787e+00 | 0.0024 | 32.0 | 3.66% | 891.8 | 1.89% | motif file (matrix) |
svg |
63 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-2 | -6.711e+00 | 0.0070 | 38.0 | 4.35% | 1196.3 | 2.54% | motif file (matrix) |
svg |
64 |
| HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer | 1e-2 | -6.675e+00 | 0.0072 | 30.0 | 3.43% | 875.9 | 1.86% | motif file (matrix) |
svg |
65 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -6.605e+00 | 0.0076 | 36.0 | 4.12% | 1121.7 | 2.38% | motif file (matrix) |
svg |
66 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -6.526e+00 | 0.0081 | 42.0 | 4.81% | 1376.8 | 2.92% | motif file (matrix) |
svg |
67 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -6.242e+00 | 0.0106 | 182.0 | 20.82% | 8011.4 | 17.01% | motif file (matrix) |
svg |
68 |
| Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer | 1e-2 | -6.099e+00 | 0.0120 | 22.0 | 2.52% | 596.1 | 1.27% | motif file (matrix) |
svg |
69 |
| YY1(Zf)/Promoter/Homer | 1e-2 | -6.043e+00 | 0.0125 | 12.0 | 1.37% | 243.1 | 0.52% | motif file (matrix) |
svg |
70 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.886e+00 | 0.0144 | 50.0 | 5.72% | 1774.3 | 3.77% | motif file (matrix) |
svg |
71 |
| RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer | 1e-2 | -5.800e+00 | 0.0155 | 54.0 | 6.18% | 1959.2 | 4.16% | motif file (matrix) |
svg |
72 |
| ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer | 1e-2 | -5.783e+00 | 0.0156 | 6.0 | 0.69% | 75.3 | 0.16% | motif file (matrix) |
svg |
73 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.774e+00 | 0.0156 | 67.0 | 7.67% | 2548.5 | 5.41% | motif file (matrix) |
svg |
74 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.655e+00 | 0.0172 | 6.0 | 0.69% | 77.6 | 0.16% | motif file (matrix) |
svg |
75 |
| bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -5.621e+00 | 0.0176 | 20.0 | 2.29% | 544.1 | 1.16% | motif file (matrix) |
svg |
76 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-2 | -5.465e+00 | 0.0203 | 92.0 | 10.53% | 3752.5 | 7.97% | motif file (matrix) |
svg |
77 |
| ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer | 1e-2 | -5.460e+00 | 0.0203 | 23.0 | 2.63% | 669.4 | 1.42% | motif file (matrix) |
svg |
78 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -5.403e+00 | 0.0210 | 100.0 | 11.44% | 4142.9 | 8.80% | motif file (matrix) |
svg |
79 |
| Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -5.292e+00 | 0.0232 | 20.0 | 2.29% | 561.4 | 1.19% | motif file (matrix) |
svg |
80 |
| RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.214e+00 | 0.0247 | 38.0 | 4.35% | 1310.5 | 2.78% | motif file (matrix) |
svg |
81 |
| NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer | 1e-2 | -5.205e+00 | 0.0247 | 7.0 | 0.80% | 112.9 | 0.24% | motif file (matrix) |
svg |
82 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.184e+00 | 0.0249 | 3.0 | 0.34% | 19.8 | 0.04% | motif file (matrix) |
svg |
83 |
| SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer | 1e-2 | -5.133e+00 | 0.0259 | 16.0 | 1.83% | 417.7 | 0.89% | motif file (matrix) |
svg |
84 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.119e+00 | 0.0259 | 83.0 | 9.50% | 3374.2 | 7.16% | motif file (matrix) |
svg |
85 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.040e+00 | 0.0277 | 83.0 | 9.50% | 3385.2 | 7.19% | motif file (matrix) |
svg |
86 |
| E2F(E2F)/Hela-CellCycle-Expression/Homer | 1e-2 | -5.020e+00 | 0.0280 | 9.0 | 1.03% | 178.0 | 0.38% | motif file (matrix) |
svg |
87 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.010e+00 | 0.0280 | 91.0 | 10.41% | 3770.5 | 8.01% | motif file (matrix) |
svg |
88 |
| ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -4.985e+00 | 0.0283 | 9.0 | 1.03% | 178.2 | 0.38% | motif file (matrix) |
svg |
89 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.842e+00 | 0.0323 | 28.0 | 3.20% | 913.2 | 1.94% | motif file (matrix) |
svg |
90 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-2 | -4.754e+00 | 0.0349 | 24.0 | 2.75% | 753.2 | 1.60% | motif file (matrix) |
svg |
91 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.673e+00 | 0.0374 | 21.0 | 2.40% | 636.8 | 1.35% | motif file (matrix) |
svg |
92 |
| Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.655e+00 | 0.0376 | 11.0 | 1.26% | 256.5 | 0.54% | motif file (matrix) |
svg |
93 |
| IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer | 1e-2 | -4.630e+00 | 0.0382 | 18.0 | 2.06% | 519.4 | 1.10% | motif file (matrix) |
svg |