Information for 7-GGCAGAATTGAGA (Motif 8)

A C T G A C T G A T G C G T C A A C T G G T C A C G T A C G A T A C G T A T C G C G T A A C T G C G T A
Reverse Opposite:
C G A T A G T C C G A T A T G C G T C A C G T A A C G T A C G T A G T C A C G T A T C G A G T C A G T C
p-value:1e-12
log p-value:-2.830e+01
Information Content per bp:1.860
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.1 +/- 24.5bp
Average Position of motif in Background54.4 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGCAGAATTGAGA-
TATCATAATTAAGGA
 A C G T A C T G A C T G A T G C G T C A A C T G G T C A C G T A C G A T A C G T A T C G C G T A A C T G C G T A A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGCAGAATTGAGA----
GGAAAAATTGTTAGGAA
 A C T G A C T G A T G C G T C A A C T G G T C A C G T A C G A T A C G T A T C G C G T A A C T G C G T A A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGAATTGAGA
TNNGGGCAG--------
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C G T C A A C T G G T C A C G T A C G A T A C G T A T C G C G T A A C T G C G T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGCAGAATTGAGA----
---AAAATTGTTATGAA
 A C T G A C T G A T G C G T C A A C T G G T C A C G T A C G A T A C G T A T C G C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0177.1_Sox7_2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GGCAGAATTGAGA---------
GTGCTAATTGTGTGTGTACGCT
 A C T G A C T G A T G C G T C A A C T G G T C A C G T A C G A T A C G T A T C G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGCAGAATTGAGA---
-NNNCCATTGTGTNAN
 A C T G A C T G A T G C G T C A A C T G G T C A C G T A C G A T A C G T A T C G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GGCAGAATTGAGA-
--CGGAAGTGAAAC
 A C T G A C T G A T G C G T C A A C T G G T C A C G T A C G A T A C G T A T C G C G T A A C T G C G T A A C G T
A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGAATTGAGA
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C G T C A A C T G G T C A C G T A C G A T A C G T A T C G C G T A A C T G C G T A
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GGCAGAATTGAGA--
-GGAGAAAGGTGCGA
 A C T G A C T G A T G C G T C A A C T G G T C A C G T A C G A T A C G T A T C G C G T A A C T G C G T A A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GGCAGAATTGAGA---
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C G T C A A C T G G T C A C G T A C G A T A C G T A T C G C G T A A C T G C G T A A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T