Information for 4-CMKYGMTYTSGGGACA (Motif 6)

A T G C T G C A C A T G A G C T C T A G G T A C A C G T A G T C A C G T A T C G A C T G A C T G A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C A G T C A G T C A T G C C G T A C T A G C G T A A C T G A G T C T C G A G T A C A C G T A T C G
p-value:1e-13
log p-value:-3.053e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 17.4bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBED1/MA0749.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CMKYGMTYTSGGGACA--
-----CTATCGCGACATA
 A T G C T G C A C A T G A G C T C T A G G T A C A C G T A G T C A C G T A T C G A C T G A C T G A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.59
Offset:8
Orientation:forward strand
Alignment:CMKYGMTYTSGGGACA
--------TGGGGA--
 A T G C T G C A C A T G A G C T C T A G G T A C A C G T A G T C A C G T A T C G A C T G A C T G A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CMKYGMTYTSGGGACA--
---GGNTCTCGCGAGAAC
 A T G C T G C A C A T G A G C T C T A G G T A C A C G T A G T C A C G T A T C G A C T G A C T G A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CMKYGMTYTSGGGACA-
-------CCAGGAACAG
 A T G C T G C A C A T G A G C T C T A G G T A C A C G T A G T C A C G T A T C G A C T G A C T G A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

GFX(?)/Promoter/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CMKYGMTYTSGGGACA--
------TCTCGCGAGAAT
 A T G C T G C A C A T G A G C T C T A G G T A C A C G T A G T C A C G T A T C G A C T G A C T G A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CMKYGMTYTSGGGACA
-GGTCANYTGAGGWCA
 A T G C T G C A C A T G A G C T C T A G G T A C A C G T A G T C A C G T A T C G A C T G A C T G A C T G C G T A A G T C C G T A
A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CMKYGMTYTSGGGACA
--------TRAGGTCA
 A T G C T G C A C A T G A G C T C T A G G T A C A C G T A G T C A C G T A T C G A C T G A C T G A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CMKYGMTYTSGGGACA-----
----NTNNNGGGGTCANGNNN
 A T G C T G C A C A T G A G C T C T A G G T A C A C G T A G T C A C G T A T C G A C T G A C T G A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.51
Offset:10
Orientation:forward strand
Alignment:CMKYGMTYTSGGGACA
----------AGGTCA
 A T G C T G C A C A T G A G C T C T A G G T A C A C G T A G T C A C G T A T C G A C T G A C T G A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CMKYGMTYTSGGGACA-----
----CTCCAGGGGTCAATTGA
 A T G C T G C A C A T G A G C T C T A G G T A C A C G T A G T C A C G T A T C G A C T G A C T G A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A