Information for 5-CGCGCCGGCGCGT (Motif 5)

A G T C A C T G A G T C C T A G A G T C T A G C T A C G A T C G A G T C A T C G T A G C C T A G A C G T
Reverse Opposite:
C G T A A G T C A T C G A T G C A C T G A T G C A G T C A T C G C T A G A G T C A C T G G T A C A C T G
p-value:1e-13
log p-value:-3.053e+01
Information Content per bp:1.811
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.5 +/- 23.9bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CGCGCCGGCGCGT
-GCGCCTGCGCA-
 A G T C A C T G A G T C C T A G A G T C T A G C T A C G A T C G A G T C A T C G T A G C C T A G A C G T
A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGCGCCGGCGCGT
CTGCGCATGCGC--
 A C G T A G T C A C T G A G T C C T A G A G T C T A G C T A C G A T C G A G T C A T C G T A G C C T A G A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGCGCCGGCGCGT
AGCGCGCC-------
 A C G T A C G T A G T C A C T G A G T C C T A G A G T C T A G C T A C G A T C G A G T C A T C G T A G C C T A G A C G T
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGCGCCGGCGCGT
GTGCGCATGCGC--
 A C G T A G T C A C T G A G T C C T A G A G T C T A G C T A C G A T C G A G T C A T C G T A G C C T A G A C G T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGCGCCGGCGCGT-
TCCGCCCCCGCATT
 A G T C A C T G A G T C C T A G A G T C T A G C T A C G A T C G A G T C A T C G T A G C C T A G A C G T A C G T
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGCGCCGGCGCGT-
NCGCAGCGGGGGGTC
 A C G T A G T C A C T G A G T C C T A G A G T C T A G C T A C G A T C G A G T C A T C G T A G C C T A G A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

EGR3/MA0732.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGCGCCGGCGCGT-
CTACGCCCACGCACT
 A C G T A G T C A C T G A G T C C T A G A G T C T A G C T A C G A T C G A G T C A T C G T A G C C T A G A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGCGCCGGCGCGT
CCCCCGCCCCCGCC-
 A C G T A C G T A G T C A C T G A G T C C T A G A G T C T A G C T A C G A T C G A G T C A T C G T A G C C T A G A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGCGCCGGCGCGT
YCCGCCCACGCN-
 A G T C A C T G A G T C C T A G A G T C T A G C T A C G A T C G A G T C A T C G T A G C C T A G A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGCGCCGGCGCGT
-ACGCCCACGCA-
 A G T C A C T G A G T C C T A G A G T C T A G C T A C G A T C G A G T C A T C G T A G C C T A G A C G T
A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T