Information for 12-GTCGTGASYG (Motif 13)

A C T G A C G T A G T C A C T G A C G T A C T G C G T A A T G C A G T C A C T G
Reverse Opposite:
A G T C C T A G A T C G A C G T A G T C C G T A A G T C A C T G G T C A A G T C
p-value:1e-9
log p-value:-2.254e+01
Information Content per bp:1.904
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif19.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets54.0 +/- 24.1bp
Average Position of motif in Background47.2 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTCGTGASYG
GTGGCGTGACNG
 A C G T A C G T A C T G A C G T A G T C A C T G A C G T A C T G C G T A A T G C A G T C A C T G
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTCGTGASYG
-NCGTGACN-
 A C T G A C G T A G T C A C T G A C G T A C T G C G T A A T G C A G T C A C T G
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTCGTGASYG
NCACGTGACN-
 A C G T A C T G A C G T A G T C A C T G A C G T A C T G C G T A A T G C A G T C A C T G
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTCGTGASYG
GTGACGTCACCG
 A C G T A C G T A C T G A C G T A G T C A C T G A C G T A C T G C G T A A T G C A G T C A C T G
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTCGTGASYG
ATGGGGTGAT--
 A C G T A C G T A C T G A C G T A G T C A C T G A C G T A C T G C G T A A T G C A G T C A C T G
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCGTGASYG-
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C G T A C T G C G T A A T G C A G T C A C T G A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0032.1_IRC900814_1/Jaspar

Match Rank:7
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------GTCGTGASYG
GNNATTTGTCGTAANN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C G T A C T G C G T A A T G C A G T C A C T G
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T A C G T

ZBED1/MA0749.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTCGTGASYG
TATGTCGCGATAG
 A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C G T A C T G C G T A A T G C A G T C A C T G
G A C T T G C A C G A T C T A G A G C T A G T C C T A G A G T C T C A G C T G A A G C T G C T A C A T G

PB0136.1_IRC900814_2/Jaspar

Match Rank:9
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------GTCGTGASYG
ATGGAAAGTCGTAAAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C G T A C T G C G T A A T G C A G T C A C T G
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTCGTGASYG
GGACGTGC---
 A C G T A C T G A C G T A G T C A C T G A C G T A C T G C G T A A T G C A G T C A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T