Information for 12-GCTATTAATA (Motif 17)

C T A G G T A C A C G T G C T A C G A T C G A T C G T A C G T A C G A T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G A T C G T A C G T A C G A T C G T A C A T G G A T C
p-value:1e-10
log p-value:-2.378e+01
Information Content per bp:1.789
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif325.9
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets50.3 +/- 28.4bp
Average Position of motif in Background50.7 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2B/MA0660.1/Jaspar

Match Rank:1
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GCTATTAATA--
GCTATAAATAGC
 C T A G G T A C A C G T G C T A C G A T C G A T C G T A C G T A C G A T C G T A A C G T A C G T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GCTATTAATA--
TCTAAAAATAGA
 C T A G G T A C A C G T G C T A C G A T C G A T C G T A C G T A C G A T C G T A A C G T A C G T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GCTATTAATA--
ACTATAAATAGA
 C T A G G T A C A C G T G C T A C G A T C G A T C G T A C G T A C G A T C G T A A C G T A C G T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GCTATTAATA--
GCTAAAAATAGC
 C T A G G T A C A C G T G C T A C G A T C G A T C G T A C G T A C G A T C G T A A C G T A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GCTATTAATA--
DCYAAAAATAGM
 C T A G G T A C A C G T G C T A C G A T C G A T C G T A C G T A C G A T C G T A A C G T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GCTATTAATA-
-CCAAAAATAG
 C T A G G T A C A C G T G C T A C G A T C G A T C G T A C G T A C G A T C G T A A C G T
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GCTATTAATA--
KCCAAAAATAGC
 C T A G G T A C A C G T G C T A C G A T C G A T C G T A C G T A C G A T C G T A A C G T A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GCTATTAATA---
ATGCTAAAAATAGAA
 A C G T A C G T C T A G G T A C A C G T G C T A C G A T C G A T C G T A C G T A C G A T C G T A A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Arid3b/MA0601.1/Jaspar

Match Rank:9
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GCTATTAATA--
-ATATTAATTAA
 C T A G G T A C A C G T G C T A C G A T C G A T C G T A C G T A C G A T C G T A A C G T A C G T
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

PH0063.1_Hoxb8/Jaspar

Match Rank:10
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GCTATTAATA--
ACCGGCAATTAATAAA
 A C G T A C G T A C G T A C G T C T A G G T A C A C G T G C T A C G A T C G A T C G T A C G T A C G A T C G T A A C G T A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A