Information for 5-TAATTACAGG (Motif 5)

A G C T C G T A C G T A A G C T G C A T C G T A T G A C C G T A C T A G A C T G
Reverse Opposite:
T G A C G A T C C G A T A C T G G C A T C G T A T C G A G C A T G A C T T C G A
p-value:1e-11
log p-value:-2.587e+01
Information Content per bp:1.667
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.37%
Number of Background Sequences with motif530.3
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets39.3 +/- 27.5bp
Average Position of motif in Background50.2 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEOX2/MA0706.1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TAATTACAGG
NTTAATTACN--
 A C G T A C G T A G C T C G T A C G T A A G C T G C A T C G T A T G A C C G T A C T A G A C T G
A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T A C G T A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:2
Score:0.76
Offset:-6
Orientation:forward strand
Alignment:------TAATTACAGG-
TCGCGATAATTACCGAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A G C T G C A T C G T A T G A C C G T A C T A G A C T G A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

VAX2/MA0723.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TAATTACAGG
CTAATTAC---
 A C G T A G C T C G T A C G T A A G C T G C A T C G T A T G A C C G T A C T A G A C T G
A G T C G A C T G T C A G C T A C G A T C A G T C T G A A G T C A C G T A C G T A C G T

VAX1/MA0722.1/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TAATTACAGG
CTAATTAC---
 A C G T A G C T C G T A C G T A A G C T G C A T C G T A T G A C C G T A C T A G A C T G
A G T C G A C T G T C A G T C A C G A T C A G T C T G A G A T C A C G T A C G T A C G T

PH0023.1_Dlx4/Jaspar

Match Rank:5
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------TAATTACAGG-
GCGCTATAATTACCGAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A G C T G C A T C G T A T G A C C G T A C T A G A C T G A C G T
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C

Dlx2/MA0885.1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TAATTACAGG
NTAATTGN---
 A C G T A G C T C G T A C G T A A G C T G C A T C G T A T G A C C G T A C T A G A C T G
C G A T G C A T T G C A C G T A C A G T C A G T C T A G A T G C A C G T A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TAATTACAGG
NNTAATTAGA--
 A C G T A C G T A G C T C G T A C G T A A G C T G C A T C G T A T G A C C G T A C T A G A C T G
A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A A C G T A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:8
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------TAATTACAGG
TATTGGTAATTACCTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A G C T G C A T C G T A T G A C C G T A C T A G A C T G
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

VSX1/MA0725.1/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TAATTACAGG
CTAATTAT---
 A C G T A G C T C G T A C G T A A G C T G C A T C G T A T G A C C G T A C T A G A C T G
G A T C G A C T G T C A T C G A G A C T C A G T C T G A A C G T A C G T A C G T A C G T

PH0055.1_Hoxa7_2/Jaspar

Match Rank:10
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TAATTACAGG--
GTAGTAATTAATGGAA
 A C G T A C G T A C G T A C G T A G C T C G T A C G T A A G C T G C A T C G T A T G A C C G T A C T A G A C T G A C G T A C G T
A C T G A C G T T G C A A C T G G C A T G T C A C G T A A C G T C A G T C G T A T G C A A C G T T C A G A T C G G T C A T G C A