Information for 8-AGRTGRTGCCAYY (Motif 4)

C G T A A C T G C T A G A C G T A C T G C T A G A G C T C T A G A G T C A G T C C G T A A G T C A G T C
Reverse Opposite:
C T A G C T A G A C G T A C T G A C T G A G T C C T G A A G T C A G T C G T C A A G T C A G T C A C G T
p-value:1e-16
log p-value:-3.800e+01
Information Content per bp:1.857
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.0 +/- 21.1bp
Average Position of motif in Background56.9 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGRTGRTGCCAYY--
AGATGCTRCTRCCHT
 C G T A A C T G C T A G A C G T A C T G C T A G A G C T C T A G A G T C A G T C C G T A A G T C A G T C A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

JUN/MA0488.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AGRTGRTGCCAYY
AAGATGATGTCAT-
 A C G T C G T A A C T G C T A G A C G T A C T G C T A G A G C T C T A G A G T C A G T C C G T A A G T C A G T C
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.67
Offset:5
Orientation:forward strand
Alignment:AGRTGRTGCCAYY-
-----ATGCCAACC
 C G T A A C T G C T A G A C G T A C T G C T A G A G C T C T A G A G T C A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

JUND(var.2)/MA0492.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGRTGRTGCCAYY
AAAGATGATGTCATC
 A C G T A C G T C G T A A C T G C T A G A C G T A C T G C T A G A G C T C T A G A G T C A G T C C G T A A G T C A G T C
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AGRTGRTGCCAYY
GCGGAGGTGTCGCCTC-
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G A C G T A C T G C T A G A G C T C T A G A G T C A G T C C G T A A G T C A G T C
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGRTGRTGCCAYY-----
--ACTATGCCAACCTACC
 C G T A A C T G C T A G A C G T A C T G C T A G A G C T C T A G A G T C A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

ATF4/MA0833.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGRTGRTGCCAYY
GGATGATGCAATA
 C G T A A C T G C T A G A C G T A C T G C T A G A G C T C T A G A G T C A G T C C G T A A G T C A G T C
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGRTGRTGCCAYY
--MTGATGCAAT-
 C G T A A C T G C T A G A C G T A C T G C T A G A G C T C T A G A G T C A G T C C G T A A G T C A G T C
A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGRTGRTGCCAYY
-NATGTTGCAA--
 C G T A A C T G C T A G A C G T A C T G C T A G A G C T C T A G A G T C A G T C C G T A A G T C A G T C
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGRTGRTGCCAYY
NGATGACGTCAT-
 C G T A A C T G C T A G A C G T A C T G C T A G A G C T C T A G A G T C A G T C C G T A A G T C A G T C
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T