Information for 6-GGGGCGCTGT (Motif 3)

C T A G A C T G A C T G A C T G G T A C C T A G A T G C A C G T A C T G A C G T
Reverse Opposite:
T G C A A G T C G T C A A T C G A G T C C A T G T G A C G T A C T G A C A G T C
p-value:1e-31
log p-value:-7.251e+01
Information Content per bp:1.859
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.69%
Number of Background Sequences with motif392.5
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets52.2 +/- 21.1bp
Average Position of motif in Background49.6 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:forward strand
Alignment:GGGGCGCTGT-
-----GCTGTG
 C T A G A C T G A C T G A C T G G T A C C T A G A T G C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGGCGCTGT-------
AGGACGCTGTAAAGGGA
 C T A G A C T G A C T G A C T G G T A C C T A G A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGGCGCTGT-------
AAGACGCTGTAAAGCGA
 C T A G A C T G A C T G A C T G G T A C C T A G A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGGCGCTGT-------
AAGACGCTGTAAAGCGA
 C T A G A C T G A C T G A C T G G T A C C T A G A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCGCTGT---
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T C T A G A C T G A C T G A C T G G T A C C T A G A T G C A C G T A C T G A C G T A C G T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

PB0202.1_Zfp410_2/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCGCTGT--
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G A C T G G T A C C T A G A T G C A C G T A C T G A C G T A C G T A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGGGCGCTGT
--GGCGCGCT
 C T A G A C T G A C T G A C T G G T A C C T A G A T G C A C G T A C T G A C G T
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGGGCGCTGT
----NGCTN-
 C T A G A C T G A C T G A C T G G T A C C T A G A T G C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GGGGCGCTGT-
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G A C T G G T A C C T A G A T G C A C G T A C T G A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCGCTGT-
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G A C T G G T A C C T A G A T G C A C G T A C T G A C G T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T