Information for 4-ATWGGTGGCA (Motif 2)

G C T A A C G T C G A T A C T G C T A G A C G T A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G G T A C A G T C G T C A A G T C A G T C G C T A C G T A C G A T
p-value:1e-55
log p-value:-1.278e+02
Information Content per bp:1.808
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif10.27%
Number of Background Sequences with motif487.4
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets48.3 +/- 17.7bp
Average Position of motif in Background51.0 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:ATWGGTGGCA-
--GGTTGGCAT
 G C T A A C G T C G A T A C T G C T A G A C G T A C T G A C T G A G T C C G T A A C G T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ATWGGTGGCA-----
TNNNNGGTGTCATNTNT
 A C G T A C G T G C T A A C G T C G A T A C T G C T A G A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ATWGGTGGCA----
NGTAGGTTGGCATNNN
 A C G T A C G T G C T A A C G T C G A T A C T G C T A G A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ATWGGTGGCA
--ARNTGACA
 G C T A A C G T C G A T A C T G C T A G A C G T A C T G A C T G A G T C C G T A
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATWGGTGGCA
--AGGTGTCA
 G C T A A C G T C G A T A C T G C T A G A C G T A C T G A C T G A G T C C G T A
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ATWGGTGGCA-
--NGTGGGCAT
 G C T A A C G T C G A T A C T G C T A G A C G T A C T G A C T G A G T C C G T A A C G T
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ATWGGTGGCA-
--TNNGGGCAG
 G C T A A C G T C G A T A C T G C T A G A C G T A C T G A C T G A G T C C G T A A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATWGGTGGCA-----
GGCGAGGGGTCAAGGGC
 A C G T A C G T G C T A A C G T C G A T A C T G C T A G A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATWGGTGGCA
--AGRGGTCA
 G C T A A C G T C G A T A C T G C T A G A C G T A C T G A C T G A G T C C G T A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATWGGTGGCA-----
NTNNNGGGGTCANGNNN
 A C G T A C G T G C T A A C G T C G A T A C T G C T A G A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A